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In the present work, we use information theory to understand the empirical convergence rate of tractography, a widely-used approach to reconstruct anatomical fiber pathways in the living brain. Based on diffusion MRI data, tractography is…

Quantitative Methods · Quantitative Biology 2018-06-13 Daniel Moyer , Paul M. Thompson , Greg Ver Steeg

Recent advances in signal processing and information theory are boosting the development of new approaches for the data-driven modelling of complex network systems. In the fields of Network Physiology and Network Neuroscience where the…

Methodology · Statistics 2024-01-23 Laura Sparacino , Yuri Antonacci , Gorana Mijatovic , Luca Faes

Permutation Entropy ($PE$) is a powerful nonlinear analysis technique for univariate time series. Recently, Permutation Entropy for Graph signals ($PEG$) has been proposed to extend PE to data residing on irregular domains. However, $PEG$…

Neurons and Cognition · Quantitative Biology 2024-01-17 John Stewart Fabila-Carrasco , Avalon Campbell-Cousins , Mario A. Parra-Rodriguez , Javier Escudero

Electroencephalography (EEG) is a tool that allows us to analyze brain activity with high temporal resolution. These measures, combined with deep learning and digital signal processing, are widely used in neurological disorder detection and…

Signal Processing · Electrical Eng. & Systems 2024-11-20 Isaac Ariza , Lorenzo J. Tardon , Ana M. Barbancho , Irene De-Torres , Isabel Barbancho

Topological data analysis (TDA) has become a powerful approach over the last twenty years, mainly due to its ability to capture the shape and the geometry inherent in the data. Persistence homology, which is a particular tool in TDA, has…

Neurons and Cognition · Quantitative Biology 2024-01-12 Anass B. El-Yaagoubi , Shuhao Jiao , Moo K. Chung , Hernando Ombao

Sleep stage classification is a widely discussed topic, due to its importance in the diagnosis of sleep disorders, e.g. insomnia. Analysis of the brain activity during sleep is necessary to gain further insight into the processing that…

Signal Processing · Electrical Eng. & Systems 2024-10-08 Alexander Edthofer , Iris Feldhammer , Thomas Fenzl , Andreas Körner , Matthias Kreuzer

Transfer entropy (TE) captures the directed relationships between two variables. Partial transfer entropy (PTE) accounts for the presence of all confounding variables of a multivariate system and infers only about direct causality. However,…

Methodology · Statistics 2021-02-03 Angeliki Papana , Ariadni Papana-Dagiasis , Elsa Siggiridou

To infer information flow in any network of agents, it is important first and foremost to establish causal temporal relations between the nodes. Practical and automated methods that can infer causality are difficult to find, and the subject…

Neural and Evolutionary Computing · Computer Science 2024-12-11 Ali Tehrani-Saleh , Christoph Adami

Elucidating principles that underlie computation in neural networks is currently a major research topic of interest in neuroscience. Transfer Entropy (TE) is increasingly used as a tool to bridge the gap between network structure, function,…

Neurons and Cognition · Quantitative Biology 2017-06-08 Madhavun Candadai Vasu , Eduardo J. Izquierdo

Stochastic resonance is a phenomenon in which noise enhances the response of a system to an input signal. The brain is an example of a system that has to detect and transmit signals in a noisy environment, suggesting that it is a good…

Neurons and Cognition · Quantitative Biology 2017-10-16 Bertha Vázquez-Rodríguez , Andrea Avena-Koenigsberger , Olaf Sporns , Alessandra Griffa , Patric Hagmann , Hernán Larralde

The main result of this thesis is the development of a novel connectivity estimation method, called Total Spiking Probability Edges (TSPE). Based on cross-correlation and edge filtering at different time scales this method is proposed and…

Signal Processing · Electrical Eng. & Systems 2020-05-15 Stefano De Blasi

Most methods for estimating configurational entropy from molecular simulation data yield upper limits except for harmonic systems where they are exact. Problems arise at diffusive systems and the presence of conformational transitions.…

Chemical Physics · Physics 2019-10-22 Jürgen Schlitter , Matthias Massarczyk

How does the information flow between different brain regions during various stimuli? This is the question we aim to address by studying complex cognitive paradigms in terms of Information Theory. To assess creativity and the emergence of…

Neurons and Cognition · Quantitative Biology 2025-07-08 Ania Mesa-Rodríguez , Ernesto Estevez-Rams , Holger Kantz

In this paper, we propose a novel information theoretic model to interpret the entire "transmission chain" comprising stimulus generation, brain processing by the human subject, and the electroencephalograph (EEG) response measurements as a…

Information Theory · Computer Science 2015-09-15 Ketan Mehta , Jörg Kliewer

We characterize different cell states, related to cancer and ageing phenotypes, by a measure of entropy of network ensembles, integrating gene expression values and protein interaction networks. The entropy measure estimates the parameter…

Molecular Networks · Quantitative Biology 2013-05-24 G. Menichetti , G. Bianconi , E. Giampieri , G. Castellani , D. Remondini

For the evaluation of information flow in bivariate time series, information measures have been employed, such as the transfer entropy (TE), the symbolic transfer entropy (STE), defined similarly to TE but on the ranks of the components of…

Methodology · Statistics 2015-06-15 Dimitris Kugiumtzis

Neural electromagnetic (EM) signals recorded non-invasively from individual human subjects vary in complexity and magnitude. Nonetheless, variation in neural activity has been difficult to quantify and interpret, due to complex, broad-band…

Neurons and Cognition · Quantitative Biology 2018-07-04 Trang-Anh Nghiem , Jean-Marc Lina , Matteo di Volo , Cristiano Capone , Alan C. Evans , Alain Destexhe , Jennifer S. Goldman

Energy efficiency is a big concern in industrial sectors. Finding the root cause of anomaly state of energy efficiency can help to improve energy efficiency of industrial systems and therefore save energy cost. In this research, we propose…

Machine Learning · Computer Science 2024-01-12 Jian Ma

Electroencephalography (EEG) visual decoding remains challenging due to the modality gap between low-SNR neural signals and highly structured vision--language spaces, making direct cross-modal alignment unstable. To address this, we propose…

Image and Video Processing · Electrical Eng. & Systems 2026-05-28 Jiahe Meng , Weiming Zeng , Yueyang Li , Bo Chai , Hongjie Yan , Zhiguo Zhang , Wai Ting Siok , Nizhuan Wang

In this paper, electroencephalography (EEG) measurements are used to infer change in cortical functional connectivity in response to change in audio stimulus. Experiments are conducted wherein the EEG activity of human subjects is recorded…

Signal Processing · Electrical Eng. & Systems 2018-02-20 Ketan Mehta , Joerg Kliewer