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Multidrug resistance consists of a series of genetic and epigenetic alternations that involve multifactorial and complex processes, which are a challenge to successful cancer treatments. Accompanied by advances in biotechnology and…

Populations and Evolution · Quantitative Biology 2022-04-19 Heyrim Cho , Doron Levy

Multiple interlinked positive feedback loops shape the stimulus responses of various biochemical systems, such as the cell cycle or intracellular calcium release. Recent studies with simplified models have identified two advantages of…

Molecular Networks · Quantitative Biology 2012-08-31 Paul Smolen , Douglas A. Baxter , John H. Byrne

Drug resistance and metastasis - the major complications in cancer - both entail adaptation of cancer cells to stress, whether a drug or a lethal new environment. Intriguingly, these adaptive processes share similar features that cannot be…

Molecular Networks · Quantitative Biology 2021-09-28 Aseel Shomar , Omri Barak , Naama Brenner

Large-scale simultaneous mRNA translation and the resulting competition for the available ribosomes has important implications to the cell's functioning and evolution. Developing a better understanding of the intricate correlations between…

Genomics · Quantitative Biology 2015-08-12 Alon Raveh , Michael Margaliot , Eduardo D. Sontag , Tamir Tuller

Most organisms grow according to simple laws, which in principle can be derived from energy conservation and scaling arguments, critically dependent on the relation between the metabolic rate B of energy flow and the organism mass m.…

We investigate the phenomenology emerging from a 2-species dynamics under the scenario of a quasi-neutral competition within a metapopulation framework. We employ stochastic and deterministic approaches, namely spatially-constrained…

Populations and Evolution · Quantitative Biology 2021-02-05 Marcelo A. Pires , Nuno Crokidakis , Silvio M. Duarte Queirós

Most human carcinomas exhibit telomere abnormalities early in the carcinogenesis process suggesting that crisis caused by telomere shortening may be a necessary event leading to human carcinomas. Epidemiological records of the age at which…

Tissues and Organs · Quantitative Biology 2007-05-23 Hermann B. Frieboes , James P. Brody

In the context of epigenetic transformations in cancer metastasis, a puzzling effect was recently discovered, in which the elimination (knock-out) of an activating regulatory element leads to increased (rather than decreased) activity of…

Molecular Networks · Quantitative Biology 2024-10-30 M. Ali Al-Radhawi , Krishna Manoj , Dhruv D. Jatkar , Alon Duvall , Domitilla Del Vecchio , Eduardo D. Sontag

We propose a simple dynamic model of cancer development that captures carcinogenesis and subsequent cancer progression. A central idea of the model is to include the immune system as an extinction threshold, similar to the strong Allee…

Quantitative Methods · Quantitative Biology 2025-06-09 Frank Bastian , Hassan Alkhayuon , Kieran Mulchrone , Micheal O'Riordain , Sebastian Wieczorek

Mutation-induced drug resistance in cancer often causes the failure of therapies and cancer recurrence, despite an initial tumor reduction. The timing of such cancer recurrence is governed by a balance between several factors such as…

Probability · Mathematics 2013-07-22 Jasmine Foo , Kevin Leder

Cancer development is driven by mutations and selective forces, including the action of the immune system and interspecific competition. When administered to patients, anti-cancer therapies affect the development and dynamics of tumours,…

Dynamical Systems · Mathematics 2021-09-30 Elena Piretto , Marcello Delitala , Peter S. Kim , Federico Frascoli

A small but growing number of people are finding interesting parallels between ecosystems as studied by ecologists (think of a Savanna or the Amazon rain forest or a Coral reef) and tumours1-3. The idea of viewing cancer from an ecological…

Tissues and Organs · Quantitative Biology 2013-05-13 David Basanta , Alexander R. A. Anderson

Microbes thrive in diverse porous environments -- from soil and riverbeds to human lungs and cancer tissues -- spanning multiple scales and conditions. Short- to long-term fluctuations in local factors induce spatio-temporal…

Biological Physics · Physics 2024-04-22 Chenyu Jin , Anupam Sengupta

microRNAs (miRNAs) regulate gene expression at post-transcriptional level by repressing target RNA molecules. Competition to bind miRNAs tends in turn to correlate their targets, establishing effective RNA-RNA interactions that can…

Molecular Networks · Quantitative Biology 2020-07-01 Mattia Miotto , Enzo Marinari , Andrea De Martino

Molecular communication (MC), a biologically inspired technology, enables applications in nanonetworks and the Internet of Everything (IoE), with great potential for intra-body systems such as drug delivery, health monitoring, and disease…

Signal Processing · Electrical Eng. & Systems 2025-05-30 Dilara Aktas , Ozgur B. Akan

We present a phase-space analysis of a mathematical model of tumor growth with an immune responses. We consider mathematical analysis of the model equations with multipoint initial condition regarding to dissipativity, boundedness of…

Dynamical Systems · Mathematics 2019-02-28 Veli Shakhmurov , Rishad Shahmurov

How self-organized networks develop, mature and degenerate is a key question for sociotechnical, cyberphysical and biological systems with potential applications from tackling violent extremism through to neurological diseases. So far, it…

Physics and Society · Physics 2017-06-05 M. Zheng , Z. Cao , Y. Vorobyeva , P. Manrique , C. Song , N. F. Johnson

It has been recently proposed that the two "emerging" hallmarks of cancer, namely altered glucose metabolism and immune evasion, may in fact be fundamentally linked (Kareva and Hahnfeldt, 2013). This connection comes from up-regulation of…

Tissues and Organs · Quantitative Biology 2014-08-05 Irina Kareva

Despite their potential to address crucial bottlenecks in computing architectures and contribute to the pool of biological inspiration for engineering, pathological biological mechanisms remain absent from computational theory. We hereby…

Neural and Evolutionary Computing · Computer Science 2025-03-18 Rosalia Moreddu , Michael Levin

From the perfect radial symmetries of radiolarian mineral skeletons to the broken symmetry of homochirality, the logic of Nature's regularities has fascinated scientists for centuries. Some of Nature's symmetries are clearly visible in…