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Many common graph data mining tasks take the form of identifying dense subgraphs (e.g. clustering, clique-finding, etc). In biological applications, the natural model for these dense substructures is often a complete bipartite graph…

Data Structures and Algorithms · Computer Science 2019-01-28 Kyle Kloster , Blair D. Sullivan , Andrew van der Poel

Binary classification problems can be naturally modeled as bipartite graphs, where we attempt to classify right nodes based on their left adjacencies. We consider the case of labeled bipartite graphs in which some labels and edges are not…

Combinatorics · Mathematics 2018-11-13 R. W. R. Darling , Mark L. Velednitsky

Graph cut problems are fundamental in Combinatorial Optimization, and are a central object of study in both theory and practice. Furthermore, the study of \emph{fairness} in Algorithmic Design and Machine Learning has recently received…

Data Structures and Algorithms · Computer Science 2022-02-17 Michael Dinitz , Aravind Srinivasan , Leonidas Tsepenekas , Anil Vullikanti

In the Minimum Bisection problem, input is a graph $G$ and the goal is to partition the vertex set into two parts $A$ and $B$, such that $||A|-|B|| \le 1$ and the number $k$ of edges between $A$ and $B$ is minimized. This problem can be…

Data Structures and Algorithms · Computer Science 2023-08-22 Tanmay Inamdar , Daniel Lokshtanov , Saket Saurabh , Vaishali Surianarayanan

Two disjoint sets of entities and their relationship can be modelled as a bipartite graph. Real-life examples include drug-target interaction in biological networks, user-item relationships in e-commerce networks, etc. Motif-based analysis…

Data Structures and Algorithms · Computer Science 2026-05-06 Mekala Kiran , Apurba Das , Suman Banerjee , Tathagata Ray

We address the problem of enumerating all maximal clique-partitions of an undirected graph and present an algorithm based on the observation that every maximal clique-partition can be produced from the maximal clique-cover of the graph by…

Discrete Mathematics · Computer Science 2023-09-26 Mircea Marin , Temur Kutsia , Cleo Pau , Mikheil Rukhaia

Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…

Data Structures and Algorithms · Computer Science 2022-05-03 Qiangqiang Dai , Rong-Hua Li , Hongchao Qin , Meihao Liao , Guoren Wang

The maximal clique enumeration (MCE) problem has numerous applications in biology, chemistry, sociology, and graph modeling. Though this problem is well studied, most current research focuses on finding solutions in large sparse graphs or…

Data Structures and Algorithms · Computer Science 2018-01-03 Pablo San Segundo , Jorge Artieda , Darren Strash

Detecting dense subgraphs from large graphs is a core component in many applications, ranging from social networks mining, bioinformatics. In this paper, we focus on mining dense subgraphs in a bipartite graph. The work is motivated by the…

Data Structures and Algorithms · Computer Science 2018-11-06 Yikun Ban

A \emph{biclique} is a maximal bipartite complete induced subgraph of $G$. Bicliques have been studied in the last years motivated by the large number of applications. In particular, enumeration of the maximal bicliques has been of interest…

Discrete Mathematics · Computer Science 2016-05-12 Marina Groshaus , Leandro Montero

Bipartite graphs characterize relationships between two different sets of entities, like actor-movie, user-item, and author-paper. The butterfly, a 4-vertices 4-edges (2,2)-biclique, is the simplest cohesive motif in a bipartite graph and…

Data Structures and Algorithms · Computer Science 2026-04-21 Xinwei Cai , Xiangyu Ke , Kai Wang , Lu Chen , Tianming Zhang , Qing Liu , Yunjun Gao

Tackling unfairness in graph learning models is a challenging task, as the unfairness issues on graphs involve both attributes and topological structures. Existing work on fair graph learning simply assumes that attributes of all nodes are…

Machine Learning · Computer Science 2023-09-01 Dongliang Guo , Zhixuan Chu , Sheng Li

As a fundamental task in graph data management, maximal clique enumeration (MCE) has attracted extensive attention from both academic and industrial communities due to its wide range of applications. However, MCE is very challenging as the…

Databases · Computer Science 2023-11-03 Wen Deng , Weiguo Zheng , Hong Cheng

Deep neural networks have achieved exceptional results across a range of applications. As the demand for efficient and sparse deep learning models escalates, the significance of model compression, particularly pruning, is increasingly…

Machine Learning · Computer Science 2025-04-01 Yucong Dai , Gen Li , Feng Luo , Xiaolong Ma , Yongkai Wu

There is arbitrariness in optimum solutions of graph-theoretic problems that can give rise to unfairness. Incorporating fairness in such problems, however, can be done in multiple ways. For instance, fairness can be defined on an individual…

Optimization and Control · Mathematics 2023-11-28 Christopher Hojny , Frits Spieksma , Sten Wessel

We give a randomized algorithm that approximates the number of independent sets in a dense, regular bipartite graph -- in the language of approximate counting, we give an FPRAS for #BIS on the class of dense, regular bipartite graphs.…

Data Structures and Algorithms · Computer Science 2023-07-20 Charlie Carlson , Ewan Davies , Alexandra Kolla , Aditya Potukuchi

Maximal clique enumeration (MCE) is crucial for tasks like community detection and biological network analysis. Existing algorithms typically adopt the branch-and-bound framework with the vertex-oriented Bron-Kerbosch (BK) branching…

Databases · Computer Science 2024-12-12 Kaixin Wang , Kaiqiang Yu , Cheng Long

Mining maximal subgraphs with cohesive structures from a bipartite graph has been widely studied. One important cohesive structure on bipartite graphs is k-biplex, where each vertex on one side disconnects at most k vertices on the other…

Databases · Computer Science 2021-12-30 Kaiqiang Yu , Cheng Long , Shengxin Liu , Da Yan

Finding cohesive subgraphs in a large graph has many important applications, such as community detection and biological network analysis. Clique is often a too strict cohesive structure since communities or biological modules rarely form as…

Data Structures and Algorithms · Computer Science 2024-06-11 Qihao Cheng , Da Yan , Tianhao Wu , Lyuheng Yuan , Ji Cheng , Zhongyi Huang , Yang Zhou

Finding Minimal Unsatisfiable Subsets (MUSes) of binary constraints is a common problem in infeasibility analysis of over-constrained systems. However, because of the exponential search space of the problem, enumerating MUSes is extremely…

Artificial Intelligence · Computer Science 2024-02-27 Panagiotis Lymperopoulos , Liping Liu