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Related papers: Run-and-tumble motion in trapping environments

200 papers

We study the large scale behavior of a collection of hard core run and tumble particles on a one dimensional lattice with periodic boundary conditions. Each particle has persistent motion in one direction decided by an associated spin…

Statistical Mechanics · Physics 2021-01-04 Rahul Dandekar , Subhadip Chakraborti , R. Rajesh

We study the transport of bacteria in a porous media modeled by a square channel containing one cylindrical obstacle via molecular dynamics simulations coupled to a lattice Boltzmann fluid. Our bacteria model is a rod-shaped rigid body…

Soft Condensed Matter · Physics 2020-11-30 Miru Lee , Christoph Lohrmann , Kai Szuttor , Harold Auradou , Christian Holm

The dynamics of heavy particles suspended in turbulent flows is of fundamental importance for a wide range of questions in astrophysics, atmospheric physics, oceanography, and technology. Laboratory experiments and numerical simulations…

Fluid Dynamics · Physics 2016-09-21 K. Gustavsson , B. Mehlig

A theoretical calculation is presented to describe the confined motion of transmembrane molecules in cell membranes. The study is analytic, based on Master equations for the probability of the molecules moving as random walkers, and leads…

Biological Physics · Physics 2009-11-13 V. M. Kenkre , L. Giuggioli , Z. Kalay

Restrictions to molecular motion by barriers (membranes) are ubiquitous in biological tissues, porous media and composite materials. A major challenge is to characterize the microstructure of a material or an organism nondestructively using…

Soft Condensed Matter · Physics 2011-03-11 Dmitry S. Novikov , Els Fieremans , Jens H. Jensen , Joseph A. Helpern

Turbulence is ubiquitous, from oceanic currents to small-scale biological and quantum systems. Self-sustained turbulent motion in microbial suspensions presents an intriguing example of collective dynamical behavior amongst the simplest…

The motion of particles suspended in environmental turbulence is relevant to many scientific fields, from sediment transport to biological interactions to underwater robotics. At very small scales and simple shapes, we are able to…

Fluid Dynamics · Physics 2015-06-02 Margaret L. Byron

We experimentally study the emergence of collective bacterial swimming, a phenomenon often referred to as bacterial turbulence. A phase diagram of the flow of 3D E. coli suspensions spanned by bacterial concentration, the swimming speed of…

Soft Condensed Matter · Physics 2021-03-09 Yi Peng , Zhengyang Liu , Xiang Cheng

It is now well established that microswimmers can be sorted or segregated fabricating suitable microfluidic devices or using external fields. A natural question is how these techniques can be employed for dividing swimmers of different…

Statistical Mechanics · Physics 2020-11-04 Matteo Paoluzzi , Luca Angelani , Andrea Puglisi

We investigate the transport properties of active particles undergoing a three-state run-and-tumble dynamics in one dimension, induced by non-reciprocal transition rates between self-propelling velocity states $\{-v, 0, +v\}$ that…

Statistical Mechanics · Physics 2025-08-15 Julio C. R. Romo-Cruz , Francisco J. Sevilla

Active matter exhibits various forms of non-equilibrium states in the absence of external forcing, including macroscopic steady-state currents. Such states are often too complex to be modelled from first principles and our understanding of…

Soft Condensed Matter · Physics 2020-09-17 Viktor Škultéty , Cesare Nardini , Joakim Stenhammar , Davide Marenduzzo , Alexander Morozov

We report an experimental, numerical and theoretical study of the motion of a ball on a rough inclined surface. The control parameters are $D$, the diameter of the ball, $\theta$, the inclination angle of the rough surface and $E_{ki}$, the…

Soft Condensed Matter · Physics 2009-10-30 C. Henrique , M. A. Aguirre , A. Calvo , I. Ippolito , S. Dippel , G. G. Batrouni , D. Bideau

Recently we studied $N$ run-and-tumble particles in one dimension - which switch with rate $\gamma$ between driving velocities $\pm v_0$ - interacting via the long range 1D Coulomb potential (also called rank interaction), both in the…

Statistical Mechanics · Physics 2025-02-14 Léo Touzo , Pierre Le Doussal

We consider the driven dynamics of a probe particle moving through an assembly of particles with competing long-range repulsive and short-range attractive interactions, which form crystal, stripe, labyrinth, and bubble states as the ratio…

Soft Condensed Matter · Physics 2025-01-10 C. Reichhardt , C. J. O. Reichhardt

We investigate the dynamics of the Fisher equation for the spreading of micro-organisms in one dimension subject to both turbulent convection and diffusion. We show that for strong enough turbulence, bacteria, for example, track in a…

Populations and Evolution · Quantitative Biology 2015-05-13 Roberto Benzi , David R. Nelson

We consider a one-dimensional Brownian motion with diffusion coefficient $D$ in the presence of $n$ partially absorbing traps with intensity $\beta$, separated by a distance $L$ and evenly spaced around the initial position of the particle.…

Statistical Mechanics · Physics 2022-11-28 Gaia Pozzoli , Benjamin De Bruyne

We study a system of self-propelled disks that perform run-and-tumble motion, where particles can adopt more than one internal state. One of those internal states can be transmitted to another particle if the particle carrying this state…

Biological Physics · Physics 2019-12-30 Fernando Peruani , Gustavo Sibona

We present a model of soft active particles that leads to a rich array of collective behavior found also in dense biological swarms of bacteria and other unicellular organisms. Our model uses only local interactions, such as Vicsek-type…

Soft Condensed Matter · Physics 2016-10-13 Ruben van Drongelen , Anshuman Pal , Carl P. Goodrich , Timon Idema

Strong electrostatic turbulence in magnetically confined plasmas is characterized by trapping or eddying of particle trajectories produced by the $E\times B$ stochastic drift. Trapping is shown to produce strong effects on test particles…

Plasma Physics · Physics 2015-05-13 Madalina Vlad , Florin Spineanu

Run-and-tumble (RNT) motion is a prominent locomotion strategy employed by many living microorganisms. It is characterized by straight swimming intervals (runs), which are interrupted by sudden reorientation events (tumbles). In contrast,…

Soft Condensed Matter · Physics 2018-02-14 Celia Lozano , Juan Ruben Gomez-Solano , Clemens Bechinger