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This paper describes REAP, a software-hardware approach that enables high performance sparse linear algebra computations on a cooperative CPU-FPGA platform. REAP carefully separates the task of organizing the matrix elements from the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-30 Mohammadreza Soltaniyeh , Richard P. Martin , Santosh Nagarakatte

This work focuses on accelerating the multiplication of a dense random matrix with a (fixed) sparse matrix, which is frequently used in sketching algorithms. We develop a novel scheme that takes advantage of blocking and recomputation…

Computational Engineering, Finance, and Science · Computer Science 2024-05-14 Tianyu Liang , Riley Murray , Aydın Buluç , James Demmel

Sparse Matrix-Vector Multiplication (SpMV) is a critical operation for the iterative solver of Finite Element Methods on computer simulation. Since the SpMV operation is a memory-bound algorithm, the efficiency of data movements heavily…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-15 Chong Chen

We introduce an algorithm for efficiently representing convolution with zero-padding and stride as a sparse transformation matrix, applied to a vectorized input through sparse matrix-vector multiplication (SpMV). We provide a theoretical…

Machine Learning · Computer Science 2024-12-02 Zan Chaudhry

Sparse linear algebra is crucial in many application domains, but challenging to handle efficiently in both software and hardware, with one- and two-sided operand sparsity handled with distinct approaches. In this work, we enhance an…

Hardware Architecture · Computer Science 2023-10-03 Paul Scheffler , Florian Zaruba , Fabian Schuiki , Torsten Hoefler , Luca Benini

Field Programmable Gate Arrays generate algorithmic specific architectures that improve the code's FLOP per watt ratio. Such devices are re-gaining interest due to the rise of new tools that facilitate their programming, such as OmpSs. The…

Computational Physics · Physics 2021-07-28 Guillermo Oyarzun , Daniel Peyrolon , Carlos Alvarez , Xavier Martorell

Recently it was shown by Nesterov (2011) that techniques form convex optimization can be used to successfully accelerate simple derivative-free randomized optimization methods. The appeal of those schemes lies in their low complexity, which…

Optimization and Control · Mathematics 2014-06-13 Sebastian U. Stich

We propose different implementations of the sparse matrix--dense vector multiplication (\spmv{}) for finite fields and rings $\Zb/m\Zb$. We take advantage of graphic card processors (GPU) and multi-core architectures. Our aim is to improve…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-09-09 Brice Boyer , Jean-Guillaume Dumas , Pascal Giorgi

General Matrix Multiplication (GEMM) is a critical kernel in high-performance computing and deep learning. While modern architectures like ARM's Scalable Matrix Extension (SME) introduce dedicated hardware for matrix operations, existing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-29 Chencheng Deng , Weiling Yang , Jianbin Fang , Dezun Dong

This paper presents an efficient method to perform Structured Matrix Approximation by Separation and Hierarchy (SMASH), when the original dense matrix is associated with a kernel function. Given points in a domain, a tree structure is first…

Numerical Analysis · Mathematics 2017-05-17 Difeng Cai , Edmond Chow , Yousef Saad , Yuanzhe Xi

Sparse matrix-vector multiplication (SpMV) is a fundamental building block for numerous applications. In this paper, we propose CSR5 (Compressed Sparse Row 5), a new storage format, which offers high-throughput SpMV on various platforms…

Mathematical Software · Computer Science 2015-04-13 Weifeng Liu , Brian Vinter

Sparse Matrix-Vector Multiplication (SpMV) has become a critical performance bottleneck in the local deployment of sparse Large Language Models (LLMs), where inference predominantly operates on workloads during the decoder phase with a…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-17 Junqing Lin , Jingwei Sun , Mingge Lu , Guangzhong Sun

We present an efficient numerical method for computing Hamiltonian matrix elements between non-orthogonal Slater determinants, focusing on the most time-consuming component of the calculation that involves a sparse array. In the usual case…

Nuclear Theory · Physics 2012-10-22 Yutaka Utsuno , Noritaka Shimizu , Takaharu Otsuka , Takashi Abe

Coordinating the design of sampling and sparse-dense matrix multiplication (SpMM) is crucial for accelerating graph neural networks (GNNs). However, due to irrational sampling strategies, existing methods face a trade-off between accuracy…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-25 Yingchen Song , Yaobin Wang , Yi Luo , Huan Wu , Pingping Tang

Achieving high performance for sparse applications is challenging due to irregular access patterns and weak locality. These properties preclude many static optimizations and degrade cache performance on traditional systems. To address these…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-12-17 Thomas B. Rolinger , Christopher D. Krieger

Sparse Matrix-matrix Multiplication (SpMM) and Sampled Dense-dense Matrix Multiplication (SDDMM) are important sparse operators in scientific computing and deep learning. Tensor Core Units (TCUs) enhance modern accelerators with superior…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-17 Jinliang Shi , Shigang Li , Youxuan Xu , Rongtian Fu , Xueying Wang , Tong Wu

Efficient execution of SPARQL queries over large RDF datasets is a topic of considerable interest due to increased use of RDF to encode data. Most of this work has followed either relational or graph-based approaches. In this paper, we…

Databases · Computer Science 2021-06-29 Yuedan Chen , M. Tamer Özsu , Guoqing Xiao , Zhuo Tang , Kenli Li

Sparse matrix multiplication operators (i.e., SpMM and SDDMM) are widely used in deep learning and scientific computing. Modern accelerators are commonly equipped with Tensor Core Units (TCUs) and CUDA cores to accelerate sparse operators.…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-23 Jinliang Shi , Shigang Li , Youxuan Xu , Xueying Wang , Rongtian Fu , Zhi Ma , Tong Wu

Miller et al. \cite{MPVX15} devised a distributed\footnote{They actually showed a PRAM algorithm. The distributed algorithm with these properties is implicit in \cite{MPVX15}.} algorithm in the CONGEST model, that given a parameter $k =…

Data Structures and Algorithms · Computer Science 2017-02-07 Michael Elkin , Ofer Neiman

Network embedding has numerous practical applications and has received extensive attention in graph learning, which aims at mapping vertices into a low-dimensional and continuous dense vector space by preserving the underlying structural…

Machine Learning · Computer Science 2024-08-07 Longlong Lin , Yunfeng Yu , Zihao Wang , Zeli Wang , Yuying Zhao , Jin Zhao , Tao Jia