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Multi-modal learning plays a crucial role in cancer diagnosis and prognosis. Current deep learning based multi-modal approaches are often limited by their abilities to model the complex correlations between genomics and histology data,…

Image and Video Processing · Electrical Eng. & Systems 2024-06-21 Yupei Zhang , Xiaofei Wang , Fangliangzi Meng , Jin Tang , Chao Li

The domain shift in pathological segmentation is an important problem, where a network trained by a source domain (collected at a specific hospital) does not work well in the target domain (from different hospitals) due to the different…

Computer Vision and Pattern Recognition · Computer Science 2023-04-27 Xiaoqing Liu , Kengo Araki , Shota Harada , Akihiko Yoshizawa , Kazuhiro Terada , Mariyo Kurata , Naoki Nakajima , Hiroyuki Abe , Tetsuo Ushiku , Ryoma Bise

Online Test-Time Adaptation (OTTA) has emerged as an effective strategy to handle distributional shifts, allowing on-the-fly adaptation of pre-trained models to new target domains during inference, without the need for source data. We…

Computer Vision and Pattern Recognition · Computer Science 2024-05-14 WeiQin Chuah , Ruwan Tennakoon , Alireza Bab-Hadiashar

The field of histology relies heavily on antiquated tissue processing and staining techniques that limit the efficiency of pathologic diagnoses of cancer and other diseases. Current staining and advanced labeling methods are often…

In digital pathology, whole slide images (WSIs) are widely used for applications such as cancer diagnosis and prognosis prediction. Visual transformer models have recently emerged as a promising method for encoding large regions of WSIs…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Shuai Jiang , Liesbeth Hondelink , Arief A. Suriawinata , Saeed Hassanpour

Unsupervised domain adaptation (UDA) has achieved remarkable success in fault diagnosis, bringing significant benefits to diverse industrial applications. While most UDA methods focus on cross-working condition scenarios where the source…

Machine Learning · Computer Science 2024-05-29 Ziyan Wang , Mohamed Ragab , Wenmian Yang , Min Wu , Sinno Jialin Pan , Jie Zhang , Zhenghua Chen

The examination of histopathology images is considered to be the gold standard for the diagnosis and stratification of cancer patients. A key challenge in the analysis of such images is their size, which can run into the gigapixels and can…

Image and Video Processing · Electrical Eng. & Systems 2021-09-09 Joseph Boyd , Mykola Liashuha , Eric Deutsch , Nikos Paragios , Stergios Christodoulidis , Maria Vakalopoulou

Purpose: Applying pre-trained medical deep learning segmentation models on out-of-domain images often yields predictions of insufficient quality. In this study, we propose to use a powerful generalizing descriptor along with augmentation to…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Christian Weihsbach , Christian N. Kruse , Alexander Bigalke , Mattias P. Heinrich

The application of supervised deep learning methods in digital pathology is limited due to their sensitivity to domain shift. Digital Pathology is an area prone to high variability due to many sources, including the common practice of…

Image and Video Processing · Electrical Eng. & Systems 2020-12-24 Jelica Vasiljević , Friedrich Feuerhake , Cédric Wemmert , Thomas Lampert

Deep learning has achieved great success in the challenging circuit annotation task by employing Convolutional Neural Networks (CNN) for the segmentation of circuit structures. The deep learning approaches require a large amount of manually…

Computer Vision and Pattern Recognition · Computer Science 2022-09-28 Yee-Yang Tee , Deruo Cheng , Chye-Soon Chee , Tong Lin , Yiqiong Shi , Bah-Hwee Gwee

Out-of-distribution (OOD) detection is crucial for ensuring the reliability and safety of machine learning models in real-world applications. While zero-shot OOD detection, which requires no training on in-distribution (ID) data, has become…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Yu Liu , Hao Tang , Haiqi Zhang , Jing Qin , Zechao Li

Real-world deployment of computer vision systems, including in the discovery processes of biomedical research, requires causal representations that are invariant to contextual nuisances and generalize to new data. Leveraging the internal…

Computer Vision and Pattern Recognition · Computer Science 2023-06-22 Wolfgang M. Pernice , Michael Doron , Alex Quach , Aditya Pratapa , Sultan Kenjeyev , Nicholas De Veaux , Michio Hirano , Juan C. Caicedo

Recently, the fundamental problem of unsupervised domain adaptation (UDA) on 3D point clouds has been motivated by a wide variety of applications in robotics, virtual reality, and scene understanding, to name a few. The point cloud data…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Siddharth Katageri , Arkadipta De , Chaitanya Devaguptapu , VSSV Prasad , Charu Sharma , Manohar Kaul

In this study, we investigate the performance of few-shot classification models across different domains, specifically natural images and histopathological images. We first train several few-shot classification models on natural images and…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Ardhendu Sekhar , Aditya Bhattacharya , Vinayak Goyal , Vrinda Goel , Aditya Bhangale , Ravi Kant Gupta , Amit Sethi

A basic assumption of statistical learning theory is that train and test data are drawn from the same underlying distribution. Unfortunately, this assumption doesn't hold in many applications. Instead, ample labeled data might exist in a…

Computer Vision and Pattern Recognition · Computer Science 2012-11-21 Oscar Beijbom

The field of computational pathology has been transformed with recent advances in foundation models that encode histopathology region-of-interests (ROIs) into versatile and transferable feature representations via self-supervised learning…

Automated detection of mitotic figures in histopathology images has seen vast improvements, thanks to modern deep learning-based pipelines. Application of these methods, however, is in practice limited by strong variability of images…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Marc Aubreville , Christof Bertram , Mitko Veta , Robert Klopfleisch , Nikolas Stathonikos , Katharina Breininger , Natalie ter Hoeve , Francesco Ciompi , Andreas Maier

Models capable of leveraging unlabelled data are crucial in overcoming large distribution gaps between the acquired datasets across different imaging devices and configurations. In this regard, self-training techniques based on…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Negin Ghamsarian , Javier Gamazo Tejero , Pablo Márquez Neila , Sebastian Wolf , Martin Zinkernagel , Klaus Schoeffmann , Raphael Sznitman

Domain adaptation solves image classification problems in the target domain by taking advantage of the labelled source data and unlabelled target data. Usually, the source and target domains share the same set of classes. As a special case,…

Computer Vision and Pattern Recognition · Computer Science 2021-10-26 Qian Wang , Fanlin Meng , Toby P. Breckon

The development of computational pathology lies in the consensus that pathological characteristics of tumors are significant guidance for cancer diagnostics. Most existing research focuses on the inner-contextual information within each WSI…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Jun Shi , Tong Shu , Zhiguo Jiang , Wei Wang , Haibo Wu , Yushan Zheng