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ROOT has several features which interact with libraries and require implicit header inclusion. This can be triggered by reading or writing data on disk, or user actions at the prompt. Often, the headers are immutable, and reparsing is…

Software Engineering · Computer Science 2020-08-26 Yuka Takahashi , Oksana Shadura , Vassil Vassilev

We introduce NSC++, a header-only C++ library that simulates the evolution of the plasma and a decaying fluid in the early Universe. NSC++ can be used in C++ programs or called directly from python scripts without significant overhead.…

Cosmology and Nongalactic Astrophysics · Physics 2023-04-26 Dimitrios Karamitros

Threads are a convenient and modular abstraction for writing concurrent programs, but often fairly expensive. The standard alternative to threads, event-loop programming, allows much lighter units of concurrency, but leads to code that is…

Programming Languages · Computer Science 2011-02-07 Gabriel Kerneis , Juliusz Chroboczek

We introduce OpenRAND, a C++17 library aimed at facilitating reproducible scientific research through the generation of statistically robust and yet replicable random numbers. OpenRAND accommodates single and multi-threaded applications on…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-01 Shihab Shahriar Khan , Bryce Palmer , Christopher Edelmaierd , Hasan Metin Aktulga

The Python Testbed for Federated Learning Algorithms is a simple Python FL framework that is easy to use by ML&AI developers who do not need to be professional programmers and is also amenable to LLMs. In the previous research, generic…

Artificial Intelligence · Computer Science 2025-09-08 Miroslav Popovic , Marko Popovic , Miodrag Djukic , Ilija Basicevic

Language-orientated programming promises to elevate programmer productivity through increased abstrac- tion capabilities. Structural programming environments provide apparatus to reduce the difficulties with syntax. The language workbench,…

Programming Languages · Computer Science 2014-03-18 Gavin Wood

We present a C++ header-only parallel sparse matrix library, based on sparse quadtree representation of matrices using the Chunks and Tasks programming model. The library implements a number of sparse matrix algorithms for distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-25 Emanuel H. Rubensson , Elias Rudberg , Anastasia Kruchinina , Anton G. Artemov

Motivation: The ability to perform operations on encrypted data has a growing number of applications in bioinformatics, with implications for data privacy in health care and biosecurity. The SEAL library is a popular implementation of fully…

Quantitative Methods · Quantitative Biology 2018-03-07 Alexander J. Titus , Shashwat Kishore , Todd Stavish , Stephanie M. Rogers , Karl Ni

Running complex sets of machine learning experiments is challenging and time-consuming due to the lack of a unified framework. This leaves researchers forced to spend time implementing necessary features such as parallelization, caching,…

Machine Learning · Computer Science 2023-11-22 Zac Pullar-Strecker , Xinglong Chang , Liam Brydon , Ioannis Ziogas , Katharina Dost , Jörg Wicker

The Epiphany is a many-core, low power, low on-chip memory architecture and one can very cheaply gain access to a number of parallel cores which is beneficial for HPC education and prototyping. The very low power nature of these…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-29 Nick Brown

The C++ programming language is not only a keystone of the high-performance-computing ecosystem but has proven to be a successful base for portable parallel-programming frameworks. As is well known, C++ programmers use templates to…

Programming Languages · Computer Science 2019-04-30 Hal Finkel , David Poliakoff , David F. Richards

Since the C++ bindings were deleted in 2008, the Message Passing Interface (MPI) community has revived efforts in building high-level modern C++ interfaces. Such interfaces are either built to serve specific scientific application needs…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-17 C. Nicole Avans , Alfredo A. Correa , Sayan Ghosh , Matthias Schimek , Joseph Schuchart , Anthony Skjellum , Evan D. Suggs , Tim Niklas Uhl

Many modern programming languages are shifting toward a functional style for collection interfaces such as sets, maps, and sequences. Functional interfaces offer many advantages, including being safe for parallelism and providing simple and…

Data Structures and Algorithms · Computer Science 2022-04-14 Laxman Dhulipala , Guy E. Blelloch , Yan Gu , Yihan Sun

This paper presents the HiPart package, an open-source native python library that provides efficient and interpret-able implementations of divisive hierarchical clustering algorithms. HiPart supports interactive visualizations for the…

Machine Learning · Statistics 2023-05-02 Panagiotis Anagnostou , Sotiris Tasoulis , Vassilis Plagianakos , Dimitris Tasoulis

Uproot reads ROOT TTrees using pure Python. For numerical and (singly) jagged arrays, this is fast because a whole block of data can be interpreted as an array without modifying the data. For other cases, such as arrays of…

High Energy Physics - Experiment · Physics 2023-03-07 Aryan Roy , Jim Pivarski

This paper introduces scikit-hubness, a Python package for efficient nearest neighbor search in high-dimensional spaces. Hubness is an aspect of the curse of dimensionality, and is known to impair various learning tasks, including…

Machine Learning · Computer Science 2021-01-12 Roman Feldbauer , Thomas Rattei , Arthur Flexer

Scikit-HEP is a community-driven and community-oriented project with the goal of providing an ecosystem for particle physics data analysis in Python. Scikit-HEP is a toolset of approximately twenty packages and a few "affiliated" packages.…

Efficient code retrieval is critical for developer productivity, yet existing benchmarks largely focus on Python and rarely stress-test robustness beyond superficial lexical cues. To address the gap, we introduce an automated pipeline for…

Software Engineering · Computer Science 2026-03-06 Kaicheng Wang , Liyan Huang , Weike Fang , Weihang Wang

The recent successes and wide spread application of compute intensive machine learning and data analytics methods have been boosting the usage of the Python programming language on HPC systems. While Python provides many advantages for the…

Machine Learning · Computer Science 2020-12-02 Dominik Strassel , Philipp Reusch , Janis Keuper

Most of Python and R scientific packages incorporate compiled scientific libraries to speed up the code and reuse legacy libraries. While several semi-automatic solutions exist to wrap these compiled libraries, the process of wrapping a…

Software Engineering · Computer Science 2017-06-01 Pierre Fernique , Christophe Pradal