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In parallel magnetic resonance imaging (pMRI) reconstruction without using estimation of coil sensitivity functions, one group of algorithms reconstruct sensitivity encoded images of the coils first followed by the magnitude only image…

Medical Physics · Physics 2013-11-12 Cishen Zhang , Ifat Al Baqee

Conventional Magnetic Resonance Imaging (MRI) is hampered by long scan times and only qualitative image contrasts that prohibit a direct comparison between different systems. To address these limitations, model-based reconstructions…

Image and Video Processing · Electrical Eng. & Systems 2022-10-24 Xiaoqing Wang , Zhengguo Tan , Nick Scholand , Volkert Roeloffs , Martin Uecker

Purpose: To develop a deep-learning-based image reconstruction framework for reproducible research in MRI. Methods: The BART toolbox offers a rich set of implementations of calibration and reconstruction algorithms for parallel imaging and…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Moritz Blumenthal , Guanxiong Luo , Martin Schilling , H. Christian M. Holme , Martin Uecker

Physics-driven deep learning methods have emerged as a powerful tool for computational magnetic resonance imaging (MRI) problems, pushing reconstruction performance to new limits. This article provides an overview of the recent developments…

Image and Video Processing · Electrical Eng. & Systems 2022-10-17 Kerstin Hammernik , Thomas Küstner , Burhaneddin Yaman , Zhengnan Huang , Daniel Rueckert , Florian Knoll , Mehmet Akçakaya

Fast and accurate MRI image reconstruction from undersampled data is crucial in clinical practice. Deep learning based reconstruction methods have shown promising advances in recent years. However, recovering fine details from undersampled…

Image and Video Processing · Electrical Eng. & Systems 2022-02-23 Eric Z. Chen , Puyang Wang , Xiao Chen , Terrence Chen , Shanhui Sun

Magnetic Resonance Imaging (MRI) is a widely used medical imaging technique, but its long acquisition time can be a limiting factor in clinical settings. To address this issue, researchers have been exploring ways to reduce the acquisition…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Pu Yang , Bin Dong

Deep learning approaches to accelerated MRI take a matrix of sampled Fourier-space lines as input and produce a spatial image as output. In this work we show that by careful choice of the offset used in the sampling procedure, the…

Image and Video Processing · Electrical Eng. & Systems 2020-02-05 Aaron Defazio

In clinical practice, multi-modal magnetic resonance imaging (MRI) with different contrasts is usually acquired in a single study to assess different properties of the same region of interest in the human body. The whole acquisition process…

Image and Video Processing · Electrical Eng. & Systems 2022-04-05 Kai Xuan , Lei Xiang , Xiaoqian Huang , Lichi Zhang , Shu Liao , Dinggang Shen , Qian Wang

Deep learning approaches have shown promising performance for compressed sensing-based Magnetic Resonance Imaging. While deep neural networks trained with mean squared error (MSE) loss functions can achieve high peak signal to noise ratio,…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Maximilian Seitzer , Guang Yang , Jo Schlemper , Ozan Oktay , Tobias Würfl , Vincent Christlein , Tom Wong , Raad Mohiaddin , David Firmin , Jennifer Keegan , Daniel Rueckert , Andreas Maier

In this article, we propose a novel regularization method for a class of nonlinear inverse problems that is inspired by an application in quantitative magnetic resonance imaging (qMRI). The latter is a special instance of a general…

Optimization and Control · Mathematics 2025-06-16 Guozhi Dong , Michael Hintermüller , Clemens Sirotenko

The goal of MRI reconstruction is to restore a high fidelity image from partially observed measurements. This partial view naturally induces reconstruction uncertainty that can only be reduced by acquiring additional measurements. In this…

Computer Vision and Pattern Recognition · Computer Science 2019-02-11 Zizhao Zhang , Adriana Romero , Matthew J. Muckley , Pascal Vincent , Lin Yang , Michal Drozdzal

Undersampling is a common method in Magnetic Resonance Imaging (MRI) to subsample the number of data points in k-space, reducing acquisition times at the cost of decreased image quality. A popular approach is to employ undersampling…

Image and Video Processing · Electrical Eng. & Systems 2023-08-23 Tobias Weber , Michael Ingrisch , Bernd Bischl , David Rügamer

Objective: Acquiring fully sampled training data is challenging for many MRI applications. We present a self-supervised image reconstruction method, termed ReSiDe, capable of recovering images solely from undersampled data. Materials and…

Image and Video Processing · Electrical Eng. & Systems 2024-11-26 Muhammad Shafique , Sizhuo Liu , Philip Schniter , Rizwan Ahmad

The acquisition of Magnetic Resonance Imaging (MRI) is inherently slow. Inspired by recent advances in deep learning, we propose a framework for reconstructing MR images from undersampled data using a deep cascade of convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2017-03-03 Jo Schlemper , Jose Caballero , Joseph V. Hajnal , Anthony Price , Daniel Rueckert

Deep learning holds great promise in the reconstruction of undersampled Magnetic Resonance Imaging (MRI) data, providing new opportunities to escalate the performance of rapid MRI. In existing deep learning-based reconstruction methods,…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Fang Liu , Lihua Chen , Richard Kijowski , Li Feng

Magnetic resonance imaging (MRI) is increasingly utilized for image-guided radiotherapy due to its outstanding soft-tissue contrast and lack of ionizing radiation. However, geometric distortions caused by gradient nonlinearity (GNL) limit…

Accelerating the data acquisition of dynamic magnetic resonance imaging (MRI) leads to a challenging ill-posed inverse problem, which has received great interest from both the signal processing and machine learning community over the last…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Chen Qin , Jo Schlemper , Jose Caballero , Anthony Price , Joseph V. Hajnal , Daniel Rueckert

Compressed sensing (CS) has been playing a key role in accelerating the magnetic resonance imaging (MRI) acquisition process. With the resurgence of artificial intelligence, deep neural networks and CS algorithms are being integrated to…

Image and Video Processing · Electrical Eng. & Systems 2021-12-24 Yutong Chen , Carola-Bibiane Schönlieb , Pietro Liò , Tim Leiner , Pier Luigi Dragotti , Ge Wang , Daniel Rueckert , David Firmin , Guang Yang

We propose a model-based deep learning architecture for the reconstruction of highly accelerated diffusion magnetic resonance imaging (MRI) that enables high resolution imaging. The proposed reconstruction jointly recovers all the diffusion…

Image and Video Processing · Electrical Eng. & Systems 2020-01-24 Merry P. Mani , Hemant K. Aggarwal , Sanjay Ghosh , Mathews Jacob

Deep learning (DL) based unrolled reconstructions have shown state-of-the-art performance for under-sampled magnetic resonance imaging (MRI). Similar to compressed sensing, DL can leverage high-dimensional data (e.g. 3D, 2D+time, 3D+time)…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Ke Wang , Michael Kellman , Christopher M. Sandino , Kevin Zhang , Shreyas S. Vasanawala , Jonathan I. Tamir , Stella X. Yu , Michael Lustig