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We systematically study the computational complexity of a broad class of computational problems in phylogenetic reconstruction. The class contains for example the rooted triple consistency problem, forbidden subtree problems, the quartet…

Computational Complexity · Computer Science 2017-08-15 Manuel Bodirsky , Peter Jonsson , Trung Van Pham

We study the computational limits of the following general hypothesis testing problem. Let H=H_n be an \emph{arbitrary} undirected graph on n vertices. We study the detection task between a ``null'' Erd\H{o}s-R\'{e}nyi random graph G(n,p)…

Statistics Theory · Mathematics 2024-03-27 Xifan Yu , Ilias Zadik , Peiyuan Zhang

In the general submatrix detection problem, the task is to detect the presence of a small $k \times k$ submatrix with entries sampled from a distribution $\mathcal{P}$ in an $n \times n$ matrix of samples from $\mathcal{Q}$. This…

Statistics Theory · Mathematics 2019-06-04 Matthew Brennan , Guy Bresler , Wasim Huleihel

The "reconfiguration problem" for circular colourings asks, given two $(p,q)$-colourings $f$ and $g$ of a graph $G$, is it possible to transform $f$ into $g$ by changing the colour of one vertex at a time such that every intermediate…

Combinatorics · Mathematics 2016-04-14 Richard C. Brewster , Sean McGuinness , Benjamin Moore , Jonathan A. Noel

The authors of ``A note on the complexity of a phaseless polynomial interpolation'' have shown that phaseless polynomial interpolation over $\mathbf{Q}$ is possible with $n+2$ points, where $n$ is the upper-bound on the degree of a…

Computational Complexity · Computer Science 2026-03-24 Michał R. Przybyłek , Paweł Siedlecki

A $(q,t)$\emph{-tree-coloring} of a graph $G$ is a $q$-coloring of vertices of $G$ such that the subgraph induced by each color class is a forest of maximum degree at most $t.$ A $(q,\infty)$\emph{-tree-coloring} of a graph $G$ is a…

Combinatorics · Mathematics 2016-03-31 Keaitsuda Maneeruk Nakprasit , Kittikorn Nakprasit

It is well-known that the graph isomorphism problem can be posed as an equivalent problem of determining whether an auxiliary graph structure contains a clique of specific order. However, the algorithms that have been developed so far for…

Data Structures and Algorithms · Computer Science 2019-10-29 Giannis Nikolentzos , Michalis Vazirgiannis

Extracting structured subgraphs inside large graphs - often known as the planted subgraph problem - is a fundamental question that arises in a range of application domains. This problem is NP-hard in general, and as a result, significant…

Optimization and Control · Mathematics 2016-05-16 Utkan Onur Candogan , Venkat Chandrasekaran

In the Colored Clustering problem, one is asked to cluster edge-colored (hyper-)graphs whose colors represent interaction types. More specifically, the goal is to select as many edges as possible without choosing two edges that share an…

Data Structures and Algorithms · Computer Science 2023-02-02 Leon Kellerhals , Tomohiro Koana , Pascal Kunz , Rolf Niedermeier

A class domination coloring (also called cd-Coloring or dominated coloring) of a graph is a proper coloring in which every color class is contained in the neighbourhood of some vertex. The minimum number of colors required for any…

Discrete Mathematics · Computer Science 2022-03-18 R. Krithika , Ashutosh Rai , Saket Saurabh , Prafullkumar Tale

We prove an arithmetic analog of the induced graph removal lemma for complexity 1 patterns over finite fields. Informally speaking, we show that given a fixed collection of $r$-colored complexity 1 arithmetic patterns over $\mathbb F_q$,…

Combinatorics · Mathematics 2022-06-03 Jacob Fox , Jonathan Tidor , Yufei Zhao

We consider the problem of identifying a maximum clique in a given graph. We have proposed a mathematical model for this problem. The model resembles the matrix decomposition of the adjacency matrix of a given graph. The objective function…

Optimization and Control · Mathematics 2023-07-19 Salma Omer , Montaz Ali

The clique chromatic number of a graph G=(V,E) is the minimum number of colors in a vertex coloring so that no maximal (with respect to containment) clique is monochromatic. We prove that the clique chromatic number of the binomial random…

Combinatorics · Mathematics 2017-11-07 Noga Alon , Michael Krivelevich

Editing a graph into a disjoint union of clusters is a standard optimization task in graph-based data clustering. Here, complementing classic work where the clusters shall be cliques, we focus on clusters that shall be 2-clubs, that is,…

Data Structures and Algorithms · Computer Science 2020-06-29 Aleksander Figiel , Anne-Sophie Himmel , André Nichterlein , Rolf Niedermeier

We study a Faulty Congested Clique model, in which an adversary may fail nodes in the network throughout the computation. We show that any task of $O(n\log{n})$-bit input per node can be solved in roughly $n$ rounds, where $n$ is the size…

Data Structures and Algorithms · Computer Science 2025-09-10 Keren Censor-Hillel , Pedro Soto

For a positive integer $k$, a $k$-colouring of a graph $G=(V,E)$ is a mapping $c: V\rightarrow\{1,2,...,k\}$ such that $c(u)\neq c(v)$ whenever $uv\in E$. The Colouring problem is to decide, for a given $G$ and $k$, whether a $k$-colouring…

Computational Complexity · Computer Science 2016-02-16 Petr A. Golovach , Matthew Johnson , Daniël Paulusma , Jian Song

The class of quasi-chain graphs is an extension of the well-studied class of chain graphs. This latter class enjoys many nice and important properties, such as bounded clique-width, implicit representation, well-quasi-ordering by induced…

Combinatorics · Mathematics 2021-04-12 Bogdan Alecu , Aistis Atminas , Vadim Lozin , Dmitriy Malyshev

Graph clustering involves the task of dividing nodes into clusters, so that the edge density is higher within clusters as opposed to across clusters. A natural, classic and popular statistical setting for evaluating solutions to this…

Machine Learning · Statistics 2016-11-17 Yudong Chen , Sujay Sanghavi , Huan Xu

We study the detection problem of finding planted solutions in random instances of flat satisfiability problems, a generalization of boolean satisfiability formulas. We describe the properties of random instances of flat satisfiability, as…

Statistics Theory · Mathematics 2019-03-07 Quentin Berthet , Jordan S. Ellenberg

The computational complexity of the Vertex Coloring problem is known for all hereditary classes of graphs defined by forbidding two connected five-vertex induced subgraphs, except for seven cases. We prove the polynomial-time solvability of…

Combinatorics · Mathematics 2018-06-04 T. Karthick , Frédéric Maffray , Lucas Pastor
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