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Machine learning techniques have found their way into computational chemistry as indispensable tools to accelerate atomistic simulations and materials design. In addition, machine learning approaches hold the potential to boost the…

Chemical Physics · Physics 2025-10-03 Johannes Voss

High precision atomic data is indispensable for experiments involving studies of fundamental interactions, astrophysics, atomic clocks, plasma science, and others. We develop new parallel atomic structure codes and explore the difficulties…

Atomic Physics · Physics 2021-03-11 C. Cheung , M. S. Safronova , S. G. Porsev

The role of discrete (or point-group) symmetries in alpha-cluster nuclei is discussed in the framework of the algebraic cluster model which describes the relative motion of the alpha-particles. Particular attention is paid to the discrete…

Nuclear Theory · Physics 2016-06-22 Roelof Bijker

Descriptors are physically-inspired schemes for representing atomistic systems that play a central role in the construction of models of potential energy surfaces. Although physical intuition can be flexibly encoded into descriptor schemes,…

Chemical Physics · Physics 2024-03-28 Gopal R. Iyer , Brenda M. Rubenstein

A fundamental problem in applying machine learning techniques for chemical problems is to find suitable representations for molecular and crystal structures. While the structure representations based on atom connectivities are prevalent for…

Machine Learning · Statistics 2016-08-23 Dipti Jasrasaria , Edward O. Pyzer-Knapp , Dmitrij Rappoport , Alan Aspuru-Guzik

A new class of matching condition between the atomistic and continuum regions is presented for the multi-scale modeling of crystals. They ensure the accurate passage of large scale information between the atomistic and continuum regions and…

Materials Science · Physics 2009-11-07 Weinan E , Zhongyi Huang

Exact calculation of electronic properties of molecules is a fundamental step for intelligent and rational compounds and materials design. The intrinsically graph-like and non-vectorial nature of molecular data generates a unique and…

Chemical Physics · Physics 2019-10-29 Alain Tchagang , Julio Valdés

Atomistic-to-Continuum (AtC) coupling methods are a novel means of computing the properties of a discrete crystal structure, such as those containing defects, that combine the accuracy of an atomistic (fully discrete) model with the…

Numerical Analysis · Mathematics 2013-09-25 Derek Olson , Pavel Bochev , Mitchell Luskin , Alexander V. Shapeev

Atomic-level modeling performed at large scales enables the investigation of mesoscale materials properties with atom-by-atom resolution. The spatial complexity of such cross-scale simulations renders them unsuitable for simple human visual…

Materials Science · Physics 2022-04-05 Heejung Chung , Rodrigo Freitas , Gowoon Cheon , Evan J. Reed

With the recent advances in machine learning for quantum chemistry, it is now possible to predict the chemical properties of compounds and to generate novel molecules. Existing generative models mostly use a string- or graph-based…

Biomolecules · Quantitative Biology 2020-10-14 Vitali Nesterov , Mario Wieser , Volker Roth

Atomistic simulations with methods such as molecular dynamics are extremely powerful tools to understand nanoscale dynamical behavior. The resulting trajectories, by the virtue of being embedded in a high-dimensional configuration space,…

Statistical Mechanics · Physics 2020-08-27 Animesh Agarwal , Sandrasegaram Gnanakaran , Nicholas Hengartner , Arthur F. Voter , Danny Perez

We introduce a representation of any atom in any chemical environment for the generation of efficient quantum machine learning (QML) models of common electronic ground-state properties. The representation is based on scaled distribution…

Chemical Physics · Physics 2018-04-18 Felix A. Faber , Anders S. Christensen , Bing Huang , O. Anatole von Lilienfeld

We analyze the dynamics of a set of two-level atoms coupled to the electromagnetic environment within a waveguide. This problem is often tackled by assuming a weak coupling between the atoms and the environment as well as the associated…

Quantum Physics · Physics 2019-01-30 Carlo Cascio , Jad C. Halimeh , Ian P. McCulloch , Alessio Recati , Ines de Vega

In this paper, we revisit the classical representation of 3D point clouds as linear shape models. Our key insight is to leverage deep learning to represent a collection of shapes as affine transformations of low-dimensional linear shape…

Computer Vision and Pattern Recognition · Computer Science 2021-12-20 Romain Loiseau , Tom Monnier , Mathieu Aubry , Loïc Landrieu

The most difficult aspect of the realistic modeling of granular materials is how to capture the real shape of the particles. Here we present a method to simulate granular materials with complex-shaped particles. The particle shape is…

Materials Science · Physics 2008-04-18 F. Alonso-Marroquin , Yucang Wang

Predicting materials properties from composition or structure is of great interest to the materials science community. Deep learning has recently garnered considerable interest in materials predictive tasks with low model errors when…

Materials Science · Physics 2021-11-01 Chi Chen , Shyue Ping Ong

Atomically Precise Manufacturing (APM) refers to the assembly of materials with atomic precision, representing a highly advanced technology with significant potential. However, the development of APM remains in its early stages, with…

Emerging Technologies · Computer Science 2024-09-04 Vadym Shvydun , Justin Sato , Gabriel Bristot

Description of a nuclear system in its ground state and at low excitations based on the equation of state (EoS) around normal density is presented. In the expansion of the EoS around the saturation point additional spin polarization terms…

Attention mechanisms are developing into a viable alternative to convolutional layers as elementary building block of NNs. Their main advantage is that they are not restricted to capture local dependencies in the input, but can draw…

Machine Learning · Computer Science 2021-09-07 Thorben Frank , Stefan Chmiela

As with many parts of the natural sciences, machine learning interatomic potentials (MLIPs) are revolutionizing the modeling of molecular crystals. However, challenges remain for the accurate and efficient calculation of sublimation…

Computational Physics · Physics 2025-09-03 Flaviano Della Pia , Benjamin X. Shi , Venkat Kapil , Andrea Zen , Dario Alfè , Angelos Michaelides
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