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Porting a scientific data analysis workflow (DAW) to a cluster infrastructure, a new software stack, or even only a new dataset with some notably different properties is often challenging. Despite the structured definition of the steps…

Scientific applications are complex, large, and often exhibit irregular and stochastic behavior. The use of efficient loop scheduling techniques in computationally-intensive applications is crucial for improving their performance on…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-08 Ali Mohammed , Ahmed Eleliemy , Florina M. Ciorba

DL compiler's primary function is to translate DNN programs written in high-level DL frameworks such as PyTorch and TensorFlow into portable executables. These executables can then be flexibly executed by the deployed host programs.…

Computation and Language · Computer Science 2023-07-12 Simin Chen , Shiyi Wei , Cong Liu , Wei Yang

SDN divides the networking landscape into 2 parts: control and data plane. SDN expanded it's foot mark starting with OpenFlow based highly flexible control plane and rigid data plane. Innovation and improvement in hardware design and…

Networking and Internet Architecture · Computer Science 2024-09-05 Debobroto Das Robin , Javed I. Khan

Exa-scale simulations are on the horizon but almost no new design for the output has been proposed in recent years. In simulations using individual time steps, the traditional snapshots are over resolving particles/cells with large time…

Instrumentation and Methods for Astrophysics · Physics 2022-10-25 Loic Hausammann , Pedro Gonnet , Matthieu Schaller

Computational reproducibility of scientific results, that is, the execution of a computational experiment (e.g., a script) using its original settings (data, code, etc.), should always be possible. However, reproducibility has become a…

Human-Computer Interaction · Computer Science 2025-04-15 Lázaro Costa , Susana Barbosa , Jácome Cunha

The rapidly increasing number of cores available in multicore processors does not necessarily lead directly to a commensurate increase in performance: programs written in conventional languages, such as C, need careful restructuring,…

Programming Languages · Computer Science 2015-01-28 Esraa Alwan , John Fitch , Julian Padget

Background: With the rapid growth of massively parallel sequencing technologies, still more laboratories are utilizing sequenced DNA fragments for genomic analyses. Interpretation of sequencing data is, however, strongly dependent on…

Developers of Molecular Dynamics (MD) codes face significant challenges when adapting existing simulation packages to new hardware. In a continuously diversifying hardware landscape it becomes increasingly difficult for scientists to be…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-14 William R. Saunders , James Grant , Eike H. Müller

Many socio-economical critical domains (such as sustainability, public health, and disasters) are characterized by highly complex and dynamic systems, requiring data and model-driven simulations to support decision-making. Due to a large…

Neural networks have been successfully applied in various resource-constrained edge devices, where usually central processing units (CPUs) instead of graphics processing units exist due to limited power availability. State-of-the-art…

Machine Learning · Computer Science 2026-01-30 Daniel Stein , Shaoyi Huang , Rolf Drechsler , Bing Li , Grace Li Zhang

A common task in scientific computing is the derivation of data. This workflow extracts the most important information from large input data and stores it in smaller derived data objects. The derived data objects can then be used for…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-10 Tobias Wegner , Mario Lassnig , Peer Ueberholz , Christian Zeitnitz

Although many investigators affirm a desire to build reasoning systems that behave consistently with the axiomatic basis defined by probability theory and utility theory, limited resources for engineering and computation can make a complete…

Artificial Intelligence · Computer Science 2013-04-11 Eric J. Horvitz

Large scale analysis of source code, and in particular scientific source code, holds the promise of better understanding the data science process, identifying analytical best practices, and providing insights to the builders of scientific…

Machine Learning · Computer Science 2020-09-01 Ge Zhang , Mike A. Merrill , Yang Liu , Jeffrey Heer , Tim Althoff

The Rubin Observatory's Data Butler is designed to allow data file location and file formats to be abstracted away from the people writing the science pipeline algorithms. The Butler works in conjunction with the workflow graph builder to…

Instrumentation and Methods for Astrophysics · Physics 2022-07-01 Tim Jenness , James F. Bosch , Nate B. Lust , Nathan M. Pease , Michelle Gower , Mikolaj Kowalik , Gregory P. Dubois-Felsmann , Fritz Mueller , Pim Schellart

Researchers and practitioners across many disciplines have recently adopted computational notebooks to develop, document, and share their scientific workflows - and the GIS community is no exception. This chapter introduces computational…

Computers and Society · Computer Science 2021-01-05 Geoff Boeing , Dani Arribas-Bel

The machine learning community currently has no standardized process for documenting datasets, which can lead to severe consequences in high-stakes domains. To address this gap, we propose datasheets for datasets. In the electronics…

This paper describes a machine learning and data science pipeline for structured information extraction from documents, implemented as a suite of open-source tools and extensions to existing tools. It centers around a methodology for…

In application domains that store data in a tabular format, a common task is to fill the values of some cells using values stored in other cells. For instance, such data completion tasks arise in the context of missing value imputation in…

Programming Languages · Computer Science 2017-07-06 Xinyu Wang , Isil Dillig , Rishabh Singh

Searching for the architecture cells is a dominant paradigm in NAS. However, little attention has been devoted to the analysis of the cell-based search spaces even though it is highly important for the continual development of NAS. In this…

Machine Learning · Statistics 2022-03-18 Xingchen Wan , Binxin Ru , Pedro M. Esperança , Zhenguo Li