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We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

Graph representation learning has rapidly emerged as a pivotal field of study. Despite its growing popularity, the majority of research has been confined to embedding single-layer graphs, which fall short in representing complex systems…

Machine Learning · Computer Science 2024-03-29 Marco Bongiovanni , Luca Gallo , Roberto Grasso , Alfredo Pulvirenti

Graph Transformers have garnered significant attention for learning graph-structured data, thanks to their superb ability to capture long-range dependencies among nodes. However, the quadratic space and time complexity hinders the…

Information Retrieval · Computer Science 2024-05-08 Huiyuan Chen , Zhe Xu , Chin-Chia Michael Yeh , Vivian Lai , Yan Zheng , Minghua Xu , Hanghang Tong

Time-series classification is one of the most frequently performed tasks in industrial data science, and one of the most widely used data representation in the industrial setting is tabular representation. In this work, we propose a novel…

Machine Learning · Computer Science 2021-10-06 Sharath M Shankaranarayana , Davor Runje

Multi-modal data comprising imaging (MRI, fMRI, PET, etc.) and non-imaging (clinical test, demographics, etc.) data can be collected together and used for disease prediction. Such diverse data gives complementary information about the…

Machine Learning · Computer Science 2018-12-27 Anees Kazi , S. Arvind krishna , Shayan Shekarforoush , Karsten Kortuem , Shadi Albarqouni , Nassir Navab

Graph Transformers excel in long-range dependency modeling, but generally require quadratic memory complexity in the number of nodes in an input graph, and hence have trouble scaling to large graphs. Sparse attention variants such as…

Machine Learning · Computer Science 2024-11-26 Hamed Shirzad , Honghao Lin , Balaji Venkatachalam , Ameya Velingker , David Woodruff , Danica Sutherland

Attention matrices are fundamental to transformer research, supporting a broad range of applications including interpretability, visualization, manipulation, and distillation. Yet, most existing analyses focus on individual attention heads…

Machine Learning · Computer Science 2026-01-27 Ido Andrew Atad , Itamar Zimerman , Shahar Katz , Lior Wolf

Temporal causal analysis means understanding the underlying causes behind observed variables over time. Deep learning based methods such as transformers are increasingly used to capture temporal dynamics and causal relationships beyond mere…

Machine Learning · Computer Science 2024-11-21 Riya Mahesh , Rahul Vashisht , Chandrashekar Lakshminarayanan

By incorporating the graph structural information into Transformers, graph Transformers have exhibited promising performance for graph representation learning in recent years. Existing graph Transformers leverage specific strategies, such…

Machine Learning · Computer Science 2022-11-16 Gaichao Li , Jinsong Chen , Kun He

Causal inference is a critical task across fields such as healthcare, economics, and the social sciences. While recent advances in machine learning, especially those based on the deep-learning architectures, have shown potential in…

Machine Learning · Statistics 2024-12-30 Manqing Liu , David R. Bellamy , Andrew L. Beam

Social learning algorithms provide models for the formation of opinions over social networks resulting from local reasoning and peer-to-peer exchanges. Interactions occur over an underlying graph topology, which describes the flow of…

Signal Processing · Electrical Eng. & Systems 2023-03-15 Valentina Shumovskaia , Konstantinos Ntemos , Stefan Vlaski , Ali H. Sayed

The self-attention mechanism, at the heart of the Transformer model, is able to effectively model pairwise interactions between tokens. However, numerous recent works have shown that it is unable to perform basic tasks involving detecting…

Machine Learning · Computer Science 2026-02-03 Sayak Chakrabarti , Toniann Pitassi , Josh Alman

Dynamic graph embedding has emerged as a very effective technique for addressing diverse temporal graph analytic tasks (i.e., link prediction, node classification, recommender systems, anomaly detection, and graph generation) in various…

Machine Learning · Computer Science 2023-12-27 Alan John Varghese , Aniruddha Bora , Mengjia Xu , George Em Karniadakis

Information extraction from semi-structured webpages provides valuable long-tailed facts for augmenting knowledge graph. Relational Web tables are a critical component containing additional entities and attributes of rich and diverse…

Information Retrieval · Computer Science 2021-02-19 Daheng Wang , Prashant Shiralkar , Colin Lockard , Binxuan Huang , Xin Luna Dong , Meng Jiang

The paradigm of Transformers using the self-attention mechanism has manifested its advantage in learning graph-structured data. Yet, Graph Transformers are capable of modeling full range dependencies but are often deficient in extracting…

Machine Learning · Computer Science 2024-09-11 Minhong Zhu , Zhenhao Zhao , Weiran Cai

The attention mechanism lies at the core of the transformer architecture, providing an interpretable model-internal signal that has motivated a growing interest in attention-based model explanations. Although attention weights do not…

Machine Learning · Computer Science 2025-08-13 Marte Eggen , Jacob Lysnæs-Larsen , Inga Strümke

We provide a probabilistic interpretation of attention and show that the standard dot-product attention in transformers is a special case of Maximum A Posteriori (MAP) inference. The proposed approach suggests the use of Expectation…

Computer Vision and Pattern Recognition · Computer Science 2021-07-06 Prasad Gabbur , Manjot Bilkhu , Javier Movellan

Accurate predictions on tabular data rely on capturing complex, dataset-specific feature interactions. Attention-based methods and graph neural networks, referred to as graph-based tabular deep learning (GTDL), aim to improve predictions by…

Machine Learning · Computer Science 2026-03-10 Elias Dubbeldam , Reza Mohammadi , Marit Schoonhoven , S. Ilker Birbil

The neural attention mechanism has been incorporated into deep neural networks to achieve state-of-the-art performance in various domains. Most such models use multi-head self-attention which is appealing for the ability to attend to…

Machine Learning · Computer Science 2021-10-26 Shujian Zhang , Xinjie Fan , Huangjie Zheng , Korawat Tanwisuth , Mingyuan Zhou

The prevalence of employing attention mechanisms has brought along concerns on the interpretability of attention distributions. Although it provides insights about how a model is operating, utilizing attention as the explanation of model…

Computer Vision and Pattern Recognition · Computer Science 2022-09-16 Tristan Gomez , Suiyi Ling , Thomas Fréour , Harold Mouchère