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We study unsupervised learning by developing introspective generative modeling (IGM) that attains a generator using progressively learned deep convolutional neural networks. The generator is itself a discriminator, capable of introspection:…

Computer Vision and Pattern Recognition · Computer Science 2017-04-26 Justin Lazarow , Long Jin , Zhuowen Tu

Natural language (NL) explanations of model predictions are gaining popularity as a means to understand and verify decisions made by large black-box pre-trained models, for NLP tasks such as Question Answering (QA) and Fact Verification.…

Computation and Language · Computer Science 2021-01-01 Kushal Lakhotia , Bhargavi Paranjape , Asish Ghoshal , Wen-tau Yih , Yashar Mehdad , Srinivasan Iyer

Sequence to sequence (SEQ2SEQ) models often lack diversity in their generated translations. This can be attributed to the limitation of SEQ2SEQ models in capturing lexical and syntactic variations in a parallel corpus resulting from…

Computation and Language · Computer Science 2018-10-18 Xuanli He , Gholamreza Haffari , Mohammad Norouzi

Learning interpretable representations of data remains a central challenge in deep learning. When training a deep generative model, the observed data are often associated with certain categorical labels, and, in parallel with learning to…

Machine Learning · Computer Science 2019-10-01 Yifan Xue , Michael Ding , Xinghua Lu

Interpretability of deep learning is widely used to evaluate the reliability of medical imaging models and reduce the risks of inaccurate patient recommendations. For models exceeding human performance, e.g. predicting RNA structure from…

Quantitative Methods · Quantitative Biology 2022-08-31 Mara Graziani , Niccolò Marini , Nicolas Deutschmann , Nikita Janakarajan , Henning Müller , María Rodríguez Martínez

Symbolic regression searches for analytic expressions that accurately describe studied phenomena. The main attraction of this approach is that it returns an interpretable model that can be insightful to users. Historically, the majority of…

Generative protein language models are a natural way to design new proteins with desired functions. However, current models are either difficult to direct to produce a protein from a specific family of interest, or must be trained on a…

Quantitative Methods · Quantitative Biology 2024-01-08 Timothy F. Truong , Tristan Bepler

Supervised learning of time series data has been extensively studied for the case of a categorical target variable. In some application domains, e.g., energy, environment and health monitoring, it occurs that the target variable is…

Machine Learning · Computer Science 2021-05-11 Dominique Gay , Alexis Bondu , Vincent Lemaire , Marc Boullé

Human intelligence exhibits compositional generalization (i.e., the capacity to understand and produce unseen combinations of seen components), but current neural seq2seq models lack such ability. In this paper, we revisit iterative…

Computation and Language · Computer Science 2020-12-09 Yinuo Guo , Hualei Zhu , Zeqi Lin , Bei Chen , Jian-Guang Lou , Dongmei Zhang

Machine learning models such as Transformers or LSTMs struggle with tasks that are compositional in nature such as those involving reasoning/inference. Although many datasets exist to evaluate compositional generalization, when it comes to…

Artificial Intelligence · Computer Science 2022-04-12 Santiago Ontanon , Joshua Ainslie , Vaclav Cvicek , Zachary Fisher

State-of-the-art text simplification (TS) systems adopt end-to-end neural network models to directly generate the simplified version of the input text, and usually function as a blackbox. Moreover, TS is usually treated as an all-purpose…

Computation and Language · Computer Science 2022-12-21 Yu Qiao , Xiaofei Li , Daniel Wiechmann , Elma Kerz

Ultra-fine entity typing plays a crucial role in information extraction by predicting fine-grained semantic types for entity mentions in text. However, this task poses significant challenges due to the massive number of entity types in the…

Computation and Language · Computer Science 2023-11-03 Yanlin Feng , Adithya Pratapa , David R Mortensen

Machine learning models are powerful but fallible. Generating adversarial examples - inputs deliberately crafted to cause model misclassification or other errors - can yield important insight into model assumptions and vulnerabilities.…

Machine Learning · Computer Science 2017-12-18 Catherine Wong

Mechanistic interpretability is an emerging diagnostic approach for neural models that has gained traction in broader natural language processing domains. This paradigm aims to provide attribution to components of neural systems where…

Information Retrieval · Computer Science 2025-01-20 Andrew Parry , Catherine Chen , Carsten Eickhoff , Sean MacAvaney

We consider the correction of errors from nucleotide sequences produced by next-generation targeted amplicon sequencing. The next-generation sequencing (NGS) platforms can provide a great deal of sequencing data thanks to their high…

Genomics · Quantitative Biology 2017-07-05 Byunghan Lee , Taesup Moon , Sungroh Yoon , Tsachy Weissman

Large Language Models such as GPTs (Generative Pre-trained Transformers) exhibit remarkable capabilities across a broad spectrum of applications. Nevertheless, due to their intrinsic complexity, these models present substantial challenges…

Machine Learning · Computer Science 2024-10-17 Ashkan Golgoon , Khashayar Filom , Arjun Ravi Kannan

We investigate how encoder-decoder models trained on a synthetic dataset of task-oriented dialogues process disfluencies, such as hesitations and self-corrections. We find that, contrary to earlier results, disfluencies have very little…

Computation and Language · Computer Science 2018-08-29 Dieuwke Hupkes , Sanne Bouwmeester , Raquel Fernández

Unsupervised learning of low-dimensional, semantic representations of words and entities has recently gained attention. In this paper we describe the Semantic Entity Retrieval Toolkit (SERT) that provides implementations of our previously…

Computation and Language · Computer Science 2017-07-18 Christophe Van Gysel , Maarten de Rijke , Evangelos Kanoulas

While large transformer models excel in predictive performance, their lack of interpretability restricts their usefulness in high-stakes domains. To remedy this, we propose the Generalized Induction-Head Model (GIM), an interpretable model…

Computation and Language · Computer Science 2025-10-31 Eunji Kim , Sriya Mantena , Weiwei Yang , Chandan Singh , Sungroh Yoon , Jianfeng Gao

We present AutoNMT, a framework to streamline the research of seq-to-seq models by automating the data pipeline (i.e., file management, data preprocessing, and exploratory analysis), automating experimentation in a toolkit-agnostic manner,…

Computation and Language · Computer Science 2023-02-13 Salvador Carrión , Francisco Casacuberta