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Clustering is a technique for the analysis of datasets obtained by empirical studies in several disciplines with a major application for biomedical research. Essentially, clustering algorithms are executed by machines aiming at finding…

Quantitative Methods · Quantitative Biology 2024-09-30 Diego Ulisse Pizzagalli , Santiago Fernandez Gonzalez , Rolf Krause

We generalize finite-sample bounds for convex clustering to the setting where affinity weights appearing in the objective correspond to a general connected graph. These bounds and their analysis lead to a better understanding of clustering…

Machine Learning · Statistics 2026-05-26 Sam Rosen , Jason Xu

Co-clustering, that is, partitioning a numerical matrix into homogeneous submatrices, has many applications ranging from bioinformatics to election analysis. Many interesting variants of co-clustering are NP-hard. We focus on the basic…

Discrete Mathematics · Computer Science 2019-06-17 Laurent Bulteau , Vincent Froese , Sepp Hartung , Rolf Niedermeier

We consider the problem of correlation clustering on graphs with constraints on both the cluster sizes and the positive and negative weights of edges. Our contributions are twofold: First, we introduce the problem of correlation clustering…

Machine Learning · Computer Science 2015-05-25 Gregory J. Puleo , Olgica Milenkovic

There are various approaches to graph learning for data clustering, incorporating different spectral and structural constraints through diverse graph structures. Some methods rely on bipartite graph models, where nodes are divided into two…

Machine Learning · Computer Science 2025-05-14 Amirhossein Javaheri , Daniel P. Palomar

Probabilistic graphical models (PGMs) are tools for solving complex probabilistic relationships. However, suboptimal PGM structures are primarily used in practice. This dissertation presents three contributions to the PGM literature. The…

Machine Learning · Computer Science 2022-05-27 Simon Streicher

We introduce a new Bayesian model for hierarchical clustering based on a prior over trees called Kingman's coalescent. We develop novel greedy and sequential Monte Carlo inferences which operate in a bottom-up agglomerative fashion. We show…

Machine Learning · Statistics 2009-07-07 Yee Whye Teh , Hal Daumé , Daniel Roy

We present a theory and an objective function for similarity-based hierarchical clustering of probabilistic partial orders and directed acyclic graphs (DAGs). Specifically, given elements $x \le y$ in the partial order, and their respective…

Machine Learning · Computer Science 2024-12-11 Daniel Bakkelund

Spectral clustering is one of the most popular methods for community detection in graphs. A key step in spectral clustering algorithms is the eigen decomposition of the $n{\times}n$ graph Laplacian matrix to extract its $k$ leading…

Machine Learning · Statistics 2018-09-10 Muni Sreenivas Pydi , Ambedkar Dukkipati

Graph clustering becomes an important problem due to emerging applications involving the web, social networks and bio-informatics. Recently, many such applications generate data in the form of streams. Clustering massive, dynamic graph…

Databases · Computer Science 2013-01-30 Yuchen Zhao , Philip S. Yu

Bi-clustering is a technique that allows for the simultaneous clustering of observations and features in a dataset. This technique is often used in bioinformatics, text mining, and time series analysis. An important advantage of…

Computation · Statistics 2023-02-09 Anastasiia Livochka , Ryan Browne , Sanjeena Subedi

In this paper, we propose an efficient clustering technique to solve the problem of clustering in the presence of obstacles. The proposed algorithm divides the spatial area into rectangular cells. Each cell is associated with statistical…

Databases · Computer Science 2009-09-25 Mohamed E. El-Sharkawi , Mohamed A. El-Zawawy

A new fast algorithm for clustering and classification of large collections of text documents is introduced. The new algorithm employs the bipartite graph that realizes the word-document matrix of the collection. Namely, the modularity of…

Information Retrieval · Computer Science 2011-05-31 Grigory Pivovarov , Sergei Trunov

We consider the problem of learning from a similarity matrix (such as spectral clustering and lowd imensional embedding), when computing pairwise similarities are costly, and only a limited number of entries can be observed. We provide a…

Machine Learning · Statistics 2014-06-11 Ethan Fetaya , Ohad Shamir , Shimon Ullman

Prior information often takes the form of parameter constraints. Bayesian methods include such information through prior distributions having constrained support. By using posterior sampling algorithms, one can quantify uncertainty without…

Methodology · Statistics 2018-09-25 Leo L Duan , Alexander L Young , Akihiko Nishimura , David B Dunson

Probabilistic relaxations of graph cuts offer a differentiable alternative to spectral clustering, enabling end-to-end and online learning without eigendecompositions, yet prior work centered on RatioCut and lacked general guarantees and…

Machine Learning · Computer Science 2026-04-02 Ayoub Ghriss

Subgraph counting is a fundamental problem in understanding and analyzing graph structured data, yet computationally challenging. This calls for an accurate and efficient algorithm for Subgraph Cardinality Estimation, which is to estimate…

Databases · Computer Science 2024-04-16 Wonseok Shin , Siwoo Song , Kunsoo Park , Wook-Shin Han

Graph based clustering is one of the major clustering methods. Most of it work in three separate steps: similarity graph construction, clustering label relaxing and label discretization with k-means. Such common practice has three…

Machine Learning · Computer Science 2019-04-26 Yudong Han , Lei Zhu , Zhiyong Cheng , Jingjing Li , Xiaobai Liu

Clustering is an essential data mining tool for analyzing and grouping similar objects. In big data applications, however, many clustering algorithms are infeasible due to their high memory requirements and/or unfavorable runtime…

Data Structures and Algorithms · Computer Science 2026-01-27 Gregor Ulm , Simon Smith , Adrian Nilsson , Emil Gustavsson , Mats Jirstrand

We consider a generalized version of the correlation clustering problem, defined as follows. Given a complete graph $G$ whose edges are labeled with $+$ or $-$, we wish to partition the graph into clusters while trying to avoid errors: $+$…

Data Structures and Algorithms · Computer Science 2016-05-25 Gregory J. Puleo , Olgica Milenkovic
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