English
Related papers

Related papers: Physical interactions promote Turing patterns

200 papers

Spatiotemporal patterns are often modeled using reaction-diffusion equations, which combine complex reactions between constituents with ideal diffusive motion. Such descriptions neglect physical interactions between constituents, which…

Biological Physics · Physics 2023-06-09 Chengjie Luo , David Zwicker

We consider a two dimensional Turing like system with two diffusing species which interact with each other. Considering the species to be charged, we include the effect of an electric field along a given direction which can lead to a drift…

Other Condensed Matter · Physics 2008-12-31 B K Agarwalla , J K Bhattacharjee , P Titum

Turing patterns formed by activator-inhibitor systems on networks are considered. The linear stability analysis shows that the Turing instability generally occurs when the inhibitor diffuses sufficiently faster than the activator. Numerical…

Pattern Formation and Solitons · Physics 2010-04-29 Hiroya Nakao , Alexander S. Mikhailov

Models of diffusion driven pattern formation that rely on the Turing mechanism are utilized in many areas of science. However, many such models suffer from the defect of requiring fine tuning of parameters or an unrealistic separation of…

Other Quantitative Biology · Quantitative Biology 2015-03-17 Thomas Butler , Nigel Goldenfeld

A class of systems is considered, where immobile species associated to distinct patches, the nodes of a network, interact both locally and at a long-range, as specified by an (interaction) adjacency matrix. Non local interactions are…

Pattern Formation and Solitons · Physics 2020-06-30 Giulia Cencetti , Federico Battiston , Timoteo Carletti , Duccio Fanelli

The emergence of stable disordered patterns in reactive system on spatially homogenous substrate is studied in the context of vegetation patterns in the semi-arid climatic zone. It is shown that reaction-diffusion systems that allow for…

Pattern Formation and Solitons · Physics 2009-11-11 Alon Manor , Nadav M. Shnerb

Many animals have patterned fur, feathers, or scales, such as the stripes of a zebra. Turing models, or reaction-diffusion systems, are a class of mathematical models of interacting species that have been successfully used to generate…

Biological Physics · Physics 2023-12-04 Michael F. Staddon

The aim of this paper is to contribute to the understanding of the pattern formation phenomenon in reaction-diffusion equations coupled with ordinary differential equations. Such systems of equations arise, for example, from modeling of…

Analysis of PDEs · Mathematics 2016-07-15 Anna Marciniak-Czochra , Grzegorz Karch , Kanako Suzuki

We study the pattern formation of chiral charges in the presence of reactions. We show that, in contrast to the original Turing's mechanism of pattern formation in diffusion-reaction systems, the interplay between chiral effects and…

Statistical Mechanics · Physics 2018-08-02 Naoki Yamamoto

Many cellular patterns exhibit a reaction-diffusion component, suggesting that Turing instability may contribute to pattern formation. However, biological gene-regulatory pathways are more complex than simple Turing activator-inhibitor…

Molecular Networks · Quantitative Biology 2024-12-05 Hazlam S. Ahmad Shaberi , Aibek Kappassov , Antonio Matas-Gil , Robert G. Endres

Turing patterns are fundamental in biophysics, emerging from short-range activation and long-range inhibition processes. However, their paradigm is based on diffusive transport processes, which yields Turing patters that are less sharp than…

Soft Condensed Matter · Physics 2023-11-13 Benjamin M. Alessio , Ankur Gupta

Turing instabilities for a two species reaction-diffusion systems is studied under anisotropic diffusion. More specifically, the diffusion constants which characterize the ability of the species to relocate in space are direction sensitive.…

Statistical Mechanics · Physics 2015-09-30 Daniel M. Busiello , Gwendoline Planchon , Malbor Asllani , Timoteo Carletti , Duccio Fanelli

Turing patterns are a cornerstone of biological self-organization, yet their emergence typically requires finely tuned parameters occupying narrow regions of high-dimensional space. This poses a fundamental challenge: how can evolving…

Cell Behavior · Quantitative Biology 2026-05-18 Seyoon Kim , Antonio Matas-Gil , Robert G. Endres

We study how the interplay of dissipation and interactions affects the dynamics of a bosonic many-body quantum system. In the presence of both dissipation and strongly repulsive interactions, observables such as the coherence and the…

Quantum Physics · Physics 2012-07-27 Dario Poletti , Jean-Sebastien Bernier , Antoine Georges , Corinna Kollath

Reaction-diffusion processes across layered media arise in several scientific domains such as pattern-forming E. coli on agar substrates, epidermal-mesenchymal coupling in development, and symmetry-breaking in cell polarisation. We develop…

Pattern Formation and Solitons · Physics 2020-09-18 Andrew L. Krause , Václav Klika , Jacob Halatek , Paul K. Grant , Thomas E. Woolley , Neil Dalchau , Eamonn A. Gaffney

Dissipative structures are generally observed when a system relaxes from a far from equilibrium state. To address the reverse question given by the title, we investigate the relaxation process in a closed chemical reaction-diffusion system…

Pattern Formation and Solitons · Physics 2007-05-23 Akinori Awazu , Kunihiko Kaneko

As proposed by Alan Turing in 1952 as a ubiquitous mechanism for nonequilibrium pattern formation, diffusional effects may destabilize uniform distributions of reacting chemical species and lead to both spatially and temporally…

Pattern Formation and Solitons · Physics 2013-10-28 Shigefumi Hata , Hiroya Nakao , Alexander S. Mikhailov

We performed an extensive numerical study of a two-dimensional reaction-diffusion system of the activator-inhibitor type in which domain patterns can form. We showed that both multidomain and labyrinthine patterns may form spontaneously as…

patt-sol · Physics 2016-09-08 C. B. Muratov , V. V. Osipov

The Turing mechanism describes the emergence of spatial patterns due to spontaneous symmetry breaking in reaction-diffusion processes and underlies many developmental processes. Identifying Turing mechanisms in biological systems defines a…

Machine Learning · Computer Science 2021-08-20 David Schnörr , Christoph Schnörr

We numerically solve the active nematohydrodynamic equations of motion, coupled to a Turing reaction-diffusion model, to study the effect of active nematic flow on the stripe patterns resulting from a Turing instability. If the activity is…

Soft Condensed Matter · Physics 2021-11-04 Saraswat Bhattacharyya , Julia M. Yeomans