Related papers: Pattern detection in ordered graphs
We described a simple algorithm running in linear time for each fixed constant $k$, that either establishes that the pathwidth of a graph $G$ is greater than $k$, or finds a path-decomposition of $G$ of width at most $O(2^{k})$. This…
We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…
The GRAPH MOTIF problem asks whether a given multiset of colors appears on a connected subgraph of a vertex-colored graph. The fastest known parameterized algorithm for this problem is based on a reduction to the $k$-Multilinear Detection…
We study a family of pattern-detection problems in vertex-colored temporal graphs. In particular, given a vertex-colored temporal graph and a multiset of colors as a query, we search for temporal paths in the graph that contain the colors…
Discovering the underlying structure of a given graph is one of the fundamental goals in graph mining. Given a graph, we can often order vertices in a way that neighboring vertices have a higher probability of being connected to each other.…
For a graph $G$ and a parameter $k$, we call a vertex $k$-enabling if it belongs both to a clique of size $k$ and to an independent set of size $k$, and we call it $k$-excluding otherwise. Motivated by issues that arise in secret sharing…
Cutwidth is one of the classic layout parameters for graphs. It measures how well one can order the vertices of a graph in a linear manner, so that the maximum number of edges between any prefix and its complement suffix is minimized. As…
We consider algorithms for finding and counting small, fixed graphs in sparse host graphs. In the non-sparse setting, the parameters treedepth and treewidth play a crucial role in fast, constant-space and polynomial-space algorithms…
We use the line digraph construction to associate an orthogonal matrix with each graph. From this orthogonal matrix, we derive two further matrices. The spectrum of each of these three matrices is considered as a graph invariant. For the…
It is known that for subgraph-closed graph classes the first-order model checking problem is fixed-parameter tractable if and only if the class is nowhere dense [Grohe, Kreutzer, Siebertz, STOC 2014]. However, the dependency on the formula…
We study the problem of graph structure identification, i.e., of recovering the graph of dependencies among time series. We model these time series data as components of the state of linear stochastic networked dynamical systems. We assume…
Graphs are used widely to model complex systems, and detecting anomalies in a graph is an important task in the analysis of complex systems. Graph anomalies are patterns in a graph that do not conform to normal patterns expected of the…
The crossing number of a graph is the least number of crossings over all drawings of the graph in the plane. Computing the crossing number of a given graph is NP-hard, but fixed-parameter tractable (FPT) with respect to the natural…
We study the problem of finding a copy of a specific induced subgraph on inhomogeneous random graphs with infinite variance power-law degrees. We provide a fast algorithm that finds a copy of any connected graph $H$ on a fixed number of $k$…
Learning properties of large graphs from samples has been an important problem in statistical network analysis since the early work of Goodman \cite{Goodman1949} and Frank \cite{Frank1978}. We revisit a problem formulated by Frank…
We investigate the parameterized complexity of the recognition problem for the proper $H$-graphs. The $H$-graphs are the intersection graphs of connected subgraphs of a subdivision of a multigraph $H$, and the properness means that the…
In this paper we investigate the parameterized complexity of the task of counting and detecting occurrences of small patterns in unit disk graphs: Given an $n$-vertex unit disk graph $G$ with an embedding of ply $p$ (that is, the graph is…
A key challenge in wireless networking is the management of interference between transmissions. Identifying which transmitters interfere with each other is a crucial first step. In this paper we cast the task of estimating the a wireless…
A graph $G$ is said to be a $(k,\ell)$-graph if its vertex set can be partitioned into $k$ independent sets and $\ell$ cliques. It is well established that the recognition problem for $(k,\ell)$-graphs is NP-complete whenever $k \geq 3$ or…
A graph with n vertices is 1-planar if it can be drawn in the plane such that each edge is crossed at most once, and is optimal if it has the maximum of 4n-8 edges. We show that optimal 1-planar graphs can be recognized in linear time. Our…