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Jupyter has become the go-to platform for developing data applications but data and security concerns, especially when dealing with healthcare, have become paramount for many institutions and applications dealing with sensitive information.…

Cryptography and Security · Computer Science 2020-06-03 Haw-minn Lu , Adrian Kwong , Jose Unpingco

One of the key skills of a researcher is noticing what's going on. Both in the experiment one's performing and in one's data: is there something interesting, reason to doubt one's data or suspect that one's theoretical description is…

Physics Education · Physics 2025-07-08 K. Dunnett , M. H. Magnusson

This article reviews recent advances in applying natural language processing (NLP) to Electronic Health Records (EHRs) for computational phenotyping. NLP-based computational phenotyping has numerous applications including diagnosis…

Computation and Language · Computer Science 2018-06-18 Zexian Zeng , Yu Deng , Xiaoyu Li , Tristan Naumann , Yuan Luo

Electronic health records (EHRs) form an invaluable resource for training clinical decision support systems. To leverage the potential of such systems in high-risk applications, we need large, structured tabular datasets on which we can…

Artificial Intelligence · Computer Science 2025-11-24 Paloma Rabaey , Adrick Tench , Stefan Heytens , Thomas Demeester

A growing body of work uses Natural Language Processing (NLP) methods to automatically generate medical notes from audio recordings of doctor-patient consultations. However, there are very few studies on how such systems could be used in…

The shift to electronic medical records (EMRs) has engendered research into machine learning and natural language technologies to analyze patient records, and to predict from these clinical outcomes of interest. Two observations motivate…

Computation and Language · Computer Science 2019-04-09 Sarthak Jain , Ramin Mohammadi , Byron C. Wallace

Background: As traditional coding tasks in education become increasingly vulnerable to the use of Generative AI, there is a critical need for authentic, project-based assessments that evaluate students' scientific inquiry. To address this…

Physics Education · Physics 2026-05-11 Sean Savage , Amir Bralin , Paul Hur , N. Sanjay Rebello

In the context of the ATLAS experiment there is growing evidence of the importance of different kinds of Meta-data including all the important details of the detector and data acquisition that are vital for the analysis of the acquired…

Post-market medical device surveillance is a challenge facing manufacturers, regulatory agencies, and health care providers. Electronic health records are valuable sources of real world evidence to assess device safety and track…

Computers and Society · Computer Science 2019-04-17 Alison Callahan , Jason A Fries , Christopher Ré , James I Huddleston , Nicholas J Giori , Scott Delp , Nigam H Shah

Computational notebooks, tools that facilitate storytelling through exploration, data analysis, and information visualization, have become the widely accepted standard in the data science community. These notebooks have been widely adopted…

Human-Computer Interaction · Computer Science 2023-08-08 Venkatesh Potluri , Sudheesh Singanamalla , Nussara Tieanklin , Jennifer Mankoff

In the electronic health record, using clinical notes to identify entities such as disorders and their temporality (e.g. the order of an event relative to a time index) can inform many important analyses. However, creating training data for…

Computation and Language · Computer Science 2021-04-07 Jason A. Fries , Ethan Steinberg , Saelig Khattar , Scott L. Fleming , Jose Posada , Alison Callahan , Nigam H. Shah

Electronic health record (EHR) systems are used extensively throughout the healthcare domain. However, data interchangeability between EHR systems is limited due to the use of different coding standards across systems. Existing methods of…

Computation and Language · Computer Science 2019-05-07 Rohollah Soltani , Alexandre Tomberg

Skin cancer is a common problem in Australia and indeed around the world. Within the domain of e-Health, there appears to be no satisfactory clinical software that follows the flow of a normal skin cancer examination. This paper introduces…

Computers and Society · Computer Science 2018-08-20 Ahmed D. Alharthi , Peter Busch , Stephen Smith

Electrocardiography plays an essential role in diagnosing and screening cardiovascular diseases in daily healthcare. Deep neural networks have shown the potentials to improve the accuracies of arrhythmia detection based on…

Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze

This research is endeavoring to design an e-learning web site on the internet having the course name as "Object Oriented Programming" (OOP) for the students of level four at Computer Science Department (CSD). This course is to be taught…

Computers and Society · Computer Science 2015-01-23 Mohammed A. Amasha , Salem Alkhalaf

Operationalizing the EU AI Act requires clear technical documentation to ensure AI systems are transparent, traceable, and accountable. Existing documentation templates for AI systems do not fully cover the entire AI lifecycle while meeting…

Machine Learning · Computer Science 2025-08-13 Laura Lucaj , Alex Loosley , Hakan Jonsson , Urs Gasser , Patrick van der Smagt

Laboratory research is a complex, collaborative process that involves several stages, including hypothesis formulation, experimental design, data generation and analysis, and manuscript writing. Although reproducibility and data sharing are…

Other Quantitative Biology · Quantitative Biology 2025-02-12 Katharine Y. Chen , Maria Toro-Moreno , Arvind Rasi Subramaniam

Novel compute systems are an emerging research topic, aiming towards building next-generation compute platforms. For these systems to thrive, they need to be provided as research infrastructure to allow acceptance and usage by a large…

Hardware Architecture · Computer Science 2025-09-24 Yannik Stradmann , Joscha Ilmberger , Eric Müller , Johannes Schemmel

Clinical notes, which can be embedded into electronic medical records, document patient care delivery and summarize interactions between healthcare providers and patients. These clinical notes directly inform patient care and can also…

Computation and Language · Computer Science 2022-03-25 Suzanna Schmeelk , Martins Samuel Dogo , Yifan Peng , Braja Gopal Patra