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Related papers: Dynamic Optimization for Monoclonal Antibody Produ…

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Antibodies are essential proteins responsible for immune responses in organisms, capable of specifically recognizing antigen molecules of pathogens. Recent advances in generative models have significantly enhanced rational antibody design.…

Artificial Intelligence · Computer Science 2025-11-10 Zichen Wang , Yaokun Ji , Jianing Tian , Shuangjia Zheng

Nonadiabatic molecular dynamics simulations aim to describe the coupled electron-nuclear dynamics of molecules in excited electronic states. These simulations have been applied to understand a plethora of photochemical and photophysical…

Increasingly volatile electricity prices make simultaneous scheduling optimization desirable for production processes and their energy systems. Simultaneous scheduling needs to account for both process dynamics and binary on/off-decisions…

Optimization and Control · Mathematics 2022-07-28 Florian Joseph Baader , André Bardow , Manuel Dahmen

We report on parallel production of Bose-Einstein condensates (BECs) in steerable, multi-plexed crossed optical dipole traps. Using a conventional trap-weakening evaporation scheme, where the optical trapping power is lowered, we obtain an…

Quantum Gases · Physics 2015-01-21 Amita Deb , Thomas McKellar , Niels Kjærgaard

Additive manufacturing (AM) techniques hold promise but face significant challenges in process planning and optimization. The large temporal and spatial variations in temperature that can occur in layer-wise AM lead to thermal excursions,…

Systems and Control · Electrical Eng. & Systems 2025-01-22 Mikhail Khrenov , William Frieden Templeton , Sneha Prabha Narra

The optimization of yields in multi-reactor systems, which are advanced tools in heterogeneous catalysis research, presents a significant challenge due to hierarchical technical constraints. To this respect, this work introduces a novel…

Machine Learning · Computer Science 2024-08-06 Markus Grimm , Sébastien Paul , Pierre Chainais

An efficient parallelization approach to simulate optical properties of ensembles of quantum emitters in realistic electromagnetic environments is considered. It relies on balancing computing load of utilized processors and is built into…

Computational Physics · Physics 2023-02-01 Maxim Sukharev

In this work the robustness of a feedback optimization scheme is discussed. Previously known results in literature, on the convergence to local optima of the optimization problem of interest, are extended to the case where the sensitivities…

Optimization and Control · Mathematics 2021-04-01 Mirko Pasquini , Kévin Colin , Véronique Chotteau , Håkan Hjalmarsson

This paper studies the problem of performing a sequence of optimal interventions in a causal dynamical system where both the target variable of interest and the inputs evolve over time. This problem arises in a variety of domains e.g.…

Machine Learning · Statistics 2021-10-27 Virginia Aglietti , Neil Dhir , Javier González , Theodoros Damoulas

Recent studies have shown that multi-step optimization based on Model Predictive Control (MPC) can effectively coordinate the increasing number of distributed renewable energy and storage resources in the power system. However, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-02 Junyao Guo , Gabriela Hug , Ozan Tonguz

Machine-designed control of complex devices or experiments can discover strategies superior to those developed via simplified models. We describe an online optimization algorithm based on Gaussian processes and apply it to optimization of…

Entropy production (EP) is a key quantity in thermodynamics, and yet measuring EP has remained a challenging task. Here we introduce an EP estimator, called multidimensional entropic bound (MEB), utilizing an ensemble of trajectories…

Statistical Mechanics · Physics 2024-09-06 Sangyun Lee , Dong-Kyum Kim , Jong-Min Park , Won Kyu Kim , Hyunggyu Park , Jae Sung Lee

Nonadiabatic unitary evolution with tailored time-dependent Hamiltonians can prepare systems of cold atomic gases with various desired properties. For a system of two one-dimensional quasicondensates coupled with a time-varying tunneling…

Quantum Gases · Physics 2013-04-09 Armin Rahmani , Takuya Kitagawa , Eugene Demler , Claudio Chamon

Bayesian Optimization (BO) is an efficient tool for optimizing black-box functions, but its theoretical guarantees typically hold in the asymptotic regime. In many critical real-world applications such as drug discovery or materials design,…

Machine Learning · Computer Science 2025-11-04 Diantong Li , Kyunghyun Cho , Chong Liu

Machine learning algorithms often struggle to control complex real-world systems. In the case of nuclear fusion, these challenges are exacerbated, as the dynamics are notoriously complex, data is poor, hardware is subject to failures, and…

Automated chemical synthesis, materials fabrication, and spectroscopic physical measurements often bring forth the challenge of process trajectory optimization, i.e., discovering the time dependence of temperature, electric field, or…

Disordered Systems and Neural Networks · Physics 2022-06-28 Mani Valleti , Rama K. Vasudevan , Maxim A. Ziatdinov , Sergei V. Kalinin

Biological systems are governed by coupled interactions between intracellular metabolism and bioreactor operation that span multiple time scales. Constraint-based metabolic models are widely used to describe intracellular metabolism, but…

Quantitative Methods · Quantitative Biology 2026-03-30 Peter E. Carstensen , Teddy Groves , Lars K. Nielsen , Ulrich Krühne , Krist V. Gernaey , John B. Jørgensen

We investigate an optimization problem that arises when working within the paradigm of Data-Driven Computational Mechanics. In the context of the diffusion-reaction problem, such an optimization problem seeks for the continuous primal…

Numerical Analysis · Mathematics 2025-06-13 Pedro B. Bazon , Cristian G. Gebhardt , Gustavo C. Buscaglia , Roberto F. Ausas

We describe an apparatus that efficiently produces $^{23}$Na Bose-Einstein condensates (BECs) in a hybrid trap that combines a quadrupole magnetic field with a far-detuned optical dipole trap. Using a Bayesian optimization framework, we…

In this work, a nonlinear model predictive controller is developed for a batch polymerization process. The physical model of the process is parameterized along a desired trajectory resulting in a trajectory linearized piecewise model (a…

Systems and Control · Computer Science 2015-02-17 Masoud Abbaszadeh , Reza Solgi
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