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Motivation: Estimating parameters from data is a key stage of the modelling process, particularly in biological systems where many parameters need to be estimated from sparse and noisy data sets. Over the years, a variety of heuristics have…

Quantitative Methods · Quantitative Biology 2011-11-07 Mariano Beguerisse-Diaz , Baojun Wang , Radhika Desikan , Mauricio Barahona

Diffusion Models have become a cornerstone of modern generative AI for their exceptional generation quality and controllability. However, their inherent \textit{multi-step iterations} and \textit{complex backbone networks} lead to…

Two major goals in machine learning are the discovery and improvement of solutions to complex problems. In this paper, we argue that complexification, i.e. the incremental elaboration of solutions through adding new structure, achieves both…

Artificial Intelligence · Computer Science 2011-07-04 R. Miikkulainen , K. O. Stanley

Bilevel optimization poses a significant computational challenge due to its nested structure, where each upper-level candidate solution requires solving a corresponding lower-level problem. While evolutionary algorithms (EAs) are effective…

Neural and Evolutionary Computing · Computer Science 2025-06-10 Dejun Xu , Jijia Chen , Gary G. Yen , Min Jiang

Artificial intelligence workloads, especially transformer models, exhibit emergent sparsity in which computations perform selective sparse access to dense data. The workloads are inefficient on hardware designed for dense computations and…

Data Structures and Algorithms · Computer Science 2024-02-23 Brian Wheatman , Meghana Madhyastha , Randal Burns

Diffusion models represent a powerful family of generative models widely used for image and video generation. However, the time-consuming deployment, long inference time, and requirements on large memory hinder their applications on…

Machine Learning · Computer Science 2025-04-18 Kafeng Wang , Jianfei Chen , He Li , Zhenpeng Mi , Jun Zhu

As two popular schools of machine learning, online learning and evolutionary computations have become two important driving forces behind real-world decision making engines for applications in biomedicine, economics, and engineering fields.…

Neural and Evolutionary Computing · Computer Science 2022-05-24 Baihan Lin

As a model-based evolutionary algorithm, estimation of distribution algorithm (EDA) possesses unique characteristics and has been widely applied to global optimization. However, traditional Gaussian EDA (GEDA) may suffer from premature…

Neural and Evolutionary Computing · Computer Science 2018-03-05 Yongsheng Liang , Zhigang Ren , Bei Pang , An Chen

Computing high quality node separators in large graphs is necessary for a variety of applications, ranging from divide-and-conquer algorithms to VLSI design. In this work, we present a novel distributed evolutionary algorithm tackling the…

Neural and Evolutionary Computing · Computer Science 2017-02-07 Peter Sanders , Christian Schulz , Darren Strash , Robert Williger

A while ago, the ideas of evolutionary biology inspired computer scientists to develop a thriving nowadays field of evolutionary computation (EC), in general, and genetic algorithms (GA), in particular. At the same time, the directed…

Quantitative Methods · Quantitative Biology 2019-12-09 Alexander Spirov , Ekaterina Myasnikova

Distribution-based search algorithms are an effective approach for evolutionary reinforcement learning of neural network controllers. In these algorithms, gradients of the total reward with respect to the policy parameters are estimated…

Neural and Evolutionary Computing · Computer Science 2020-12-09 Nihat Engin Toklu , Paweł Liskowski , Rupesh Kumar Srivastava

The search ability of an Evolutionary Algorithm (EA) depends on the variation among the individuals in the population. Maintaining an optimal level of diversity in the EA population is imperative to ensure that progress of the EA search is…

Neural and Evolutionary Computing · Computer Science 2014-11-18 Maumita Bhattacharya

This study presents a neural network-enhanced approach to modeling disease spread dynamics over time and space. Neural networks are used to estimate time-varying parameters, with two calibration methods explored: Approximate Bayesian…

Quantitative Methods · Quantitative Biology 2024-10-29 Randy L. Caga-anan

Natural selection is general and powerful concept not only to explain evolutionary processes of biological organisms but also to design engineering systems such as genetic algorithms and particle filters. There is a surge of interest, both…

Populations and Evolution · Quantitative Biology 2021-06-09 So Nakashima , Tetsuya J. Kobayashi

Many evolutionary algorithms (EAs) take advantage of parallel evaluation of candidates. However, if evaluation times vary significantly, many worker nodes (i.e.,\ compute clients) are idle much of the time, waiting for the next generation…

Neural and Evolutionary Computing · Computer Science 2024-01-02 Jason Liang , Hormoz Shahrzad , Risto Miikkulainen

Evolution has produced an astonishing diversity of species, each filling a different niche. Algorithms like MAP-Elites mimic this divergent evolutionary process to find a set of behaviorally diverse but high-performing solutions, called the…

Neural and Evolutionary Computing · Computer Science 2018-04-12 Vassilis Vassiliades , Jean-Baptiste Mouret

Evolutionary algorithms have been frequently applied to constrained continuous optimisation problems. We carry out feature based comparisons of different types of evolutionary algorithms such as evolution strategies, differential evolution…

Artificial Intelligence · Computer Science 2015-09-24 Shayan Poursoltan , Frank Neumann

Feature selection is one of the most challenging issues in machine learning, especially while working with high dimensional data. In this paper, we address the problem of feature selection and propose a new approach called Evolving Fast and…

Neural and Evolutionary Computing · Computer Science 2020-05-12 Uzay Cetin , Yunus Emre Gundogmus

Evolutionary neural architecture search (ENAS) employs evolutionary algorithms to find high-performing neural architectures automatically, and has achieved great success. However, compared to the empirical success, its rigorous theoretical…

Neural and Evolutionary Computing · Computer Science 2024-04-09 Zeqiong Lv , Chao Qian , Yanan Sun

Along with the development of manufacture and services, the problem of distribution network optimization has been growing in importance, thus receiving much attention from the research community. One of the most recently introduced network…

Neural and Evolutionary Computing · Computer Science 2019-08-21 Huynh Thi Thanh Binh , Pham Dinh Thanh , Ta Bao Thang