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Neighbor Embedding (NE) aims to preserve pairwise similarities between data items and has been shown to yield an effective principle for data visualization. However, even the best existing NE methods such as Stochastic Neighbor Embedding…

Machine Learning · Computer Science 2021-09-15 Zhirong Yang , Yuwei Chen , Denis Sedov , Samuel Kaski , Jukka Corander

We extend a well-known dimension reduction method, t-distributed stochastic neighbor embedding (t-SNE), from non-parametric to parametric by training neural networks. The main advantage of a parametric technique is the generalization of…

Machine Learning · Computer Science 2020-10-01 Chien-Hsun Lai , Yu-Shuen Wang

Segmentation of plant point clouds to obtain high-precise morphological traits is essential for plant phenotyping. Although the fast development of deep learning has boosted much research on segmentation of plant point clouds, previous…

Computer Vision and Pattern Recognition · Computer Science 2024-01-23 Ruiming Du , Zhihong Ma , Pengyao Xie , Yong He , Haiyan Cen

The t-distributed Stochastic Neighbor Embedding (t-SNE) is a powerful and popular method for visualizing high-dimensional data. It minimizes the Kullback-Leibler (KL) divergence between the original and embedded data distributions. In this…

Machine Learning · Computer Science 2018-11-06 Daniel Jiwoong Im , Nakul Verma , Kristin Branson

The recent advancements in computational power and machine learning algorithms have led to vast improvements in manifold areas of research. Especially in finance, the application of machine learning enables both researchers and…

Statistical Finance · Quantitative Finance 2020-05-21 Sven Husmann , Antoniya Shivarova , Rick Steinert

t-Distributed Stochastic Neighbor Embedding (t-SNE) is one of the most widely used dimensionality reduction methods for data visualization, but it has a perplexity hyperparameter that requires manual selection. In practice, proper tuning of…

Artificial Intelligence · Computer Science 2017-08-11 Yanshuai Cao , Luyu Wang

Stochastic Neighbor Embedding and its variants are widely used dimensionality reduction techniques -- despite their popularity, no theoretical results are known. We prove that the optimal SNE embedding of well-separated clusters from high…

Machine Learning · Statistics 2017-02-24 Uri Shaham , Stefan Steinerberger

Non-linear dimensionality reduction can be performed by \textit{manifold learning} approaches, such as Stochastic Neighbour Embedding (SNE), Locally Linear Embedding (LLE) and Isometric Feature Mapping (ISOMAP). These methods aim to produce…

Machine Learning · Statistics 2021-12-09 Theodoulos Rodosthenous , Vahid Shahrezaei , Marina Evangelou

Accurate point cloud segmentation for plant organs is crucial for 3D plant phenotyping. Existing solutions are designed problem-specific with a focus on certain plant species or specified sensor-modalities for data acquisition. Furthermore,…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Andreas Gilson , Lukas Meyer , Oliver Scholz , Ute Schmid

The optimization of electric machines at multiple operating points is crucial for applications that require frequent changes on speeds and loads, such as the electric vehicles, to strive for the machine optimal performance across the entire…

Machine Learning · Computer Science 2019-11-05 Shen Zhang , Shibo Zhang , Sufei Li , Liang Du , Thomas G. Habetler

We present a new method GTSNE to visualize high-dimensional data points in the two dimensional map. The technique is a variation of t-SNE that produces better visualizations by capturing both the local neighborhood structure and the macro…

Machine Learning · Computer Science 2021-08-04 Songting Shi

The precise characterization of plant morphology provides valuable insights into plant environment interactions and genetic evolution. A key technology for extracting this information is 3D segmentation, which delineates individual plant…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Ruiming Du , Guangxun Zhai , Tian Qiu , Yu Jiang

Dimension reduction, widely used in science, maps high-dimensional data into low-dimensional space. We investigate a basic mathematical model underlying the techniques of stochastic neighborhood embedding (SNE) and its popular variant…

Machine Learning · Statistics 2025-03-26 Ben Weinkove

Dimensionality reduction methods such as t-SNE and UMAP are popular methods for visualizing data with a potential (latent) clustered structure. They are known to group data points at the same time as they embed them, resulting in…

Machine Learning · Computer Science 2025-09-04 Elizabeth Coda , Ery Arias-Castro , Gal Mishne

High-dimensional imaging is becoming increasingly relevant in many fields from astronomy and cultural heritage to systems biology. Visual exploration of such high-dimensional data is commonly facilitated by dimensionality reduction.…

Computer Vision and Pattern Recognition · Computer Science 2023-08-04 Alexander Vieth , Anna Vilanova , Boudewijn Lelieveldt , Elmar Eisemann , Thomas Höllt

Semantic labeling of 3D point clouds is important for the derivation of 3D models from real world scenarios in several economic fields such as building industry, facility management, town planning or heritage conservation. In contrast to…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Bernhard Japes , Jennifer Mack , Florian Rist , Katja Herzog , Reinhard Töpfer , Volker Steinhage

Point clouds analysis has grasped researchers' eyes in recent years, while 3D semantic segmentation remains a problem. Most deep point clouds models directly conduct learning on 3D point clouds, which will suffer from the severe sparsity…

Computer Vision and Pattern Recognition · Computer Science 2021-09-21 Zhenhong Zou , Yizhe Li

T-distributed stochastic neighbour embedding (t-SNE) is a widely used data visualisation technique. It differs from its predecessor SNE by the low-dimensional similarity kernel: the Gaussian kernel was replaced by the heavy-tailed Cauchy…

Machine Learning · Computer Science 2020-07-20 Dmitry Kobak , George Linderman , Stefan Steinerberger , Yuval Kluger , Philipp Berens

Creation of new annotated public datasets is crucial in helping advances in 3D computer vision and machine learning meet their full potential for automatic interpretation of 3D plant models. Despite the proliferation of deep neural network…

Computer Vision and Pattern Recognition · Computer Science 2025-12-08 Kerem Mertoğlu , Yusuf Şalk , Server Karahan Sarıkaya , Kaya Turgut , Yasemin Evrenesoğlu , Hakan Çevikalp , Ömer Nezih Gerek , Helin Dutağacı , David Rousseau

Point clouds have been widely adopted in 3D semantic scene understanding. However, point clouds for typical tasks such as 3D shape segmentation or indoor scenario parsing are much denser than outdoor LiDAR sweeps for the application of…

Computer Vision and Pattern Recognition · Computer Science 2020-04-08 Yang Zheng , Izzat H. Izzat , Sanling Song