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We discuss two views on extending existing methods for complex network modeling which we dub the communities first and the networks first view, respectively. Inspired by the networks first view that we attribute to White, Boorman, and…
The stochastic block model (SBM) is a popular model for capturing community structure and interaction within a network. Network data with non-Boolean edge weights is becoming commonplace; however, existing analysis methods convert such data…
The stochastic block model (SBM) is a probabilistic model for community structure in networks. Typically, only the adjacency matrix is used to perform SBM parameter inference. In this paper, we consider circumstances in which nodes have an…
Unravelling the block structure of a network is critical for studying macroscopic features and community-level dynamics. The weighted stochastic block model (WSBM), a variation of the traditional stochastic block model, is designed for…
We derive rigorous bounds for well-defined community structure in complex networks for a stochastic block model (SBM) benchmark. In particular, we analyze the effect of inter-community "noise" (inter-community edges) on any "community…
We present a Markov chain Monte Carlo scheme based on merges and splits of groups that is capable of efficiently sampling from the posterior distribution of network partitions, defined according to the stochastic block model (SBM). We…
In this study we map out the large-scale structure of citation networks of science journals and follow their evolution in time by using stochastic block models (SBMs). The SBM fitting procedures are principled methods that can be used to…
The stochastic block model (SBM) and degree-corrected block model (DCBM) are network models often selected as the fundamental setting in which to analyze the theoretical properties of community detection methods. We consider the problem of…
Identifying edge-dense communities that are also well-connected is an important aspect of understanding community structure. Prior work has shown that community detection methods can produce poorly connected communities, and some can even…
Clustering of single-cell RNA sequencing (scRNA-seq) datasets can give key insights into the biological functions of cells. Therefore, it is not surprising that network-based community detection methods (one of the better clustering…
This paper examines the latent functional block structure of Japan's production network using interregional input-output data. To isolate non-trivial production linkages, we first estimate a structural gravity model to account for spatial…
This paper considers the problem of community detection on multiple potentially correlated graphs from an information-theoretical perspective. We first put forth a random graph model, called the multi-view stochastic block model (MVSBM),…
Discovering and characterizing the large-scale topological features in empirical networks are crucial steps in understanding how complex systems function. However, most existing methods used to obtain the modular structure of networks…
We introduce the Markov Stochastic Block Model (MSBM): a growth model for community based networks where node attributes are assigned through a Markovian dynamic. We rely on HMMs' literature to design prediction methods that are robust to…
The rise in complexity of network data in neuroscience, social networks, and protein-protein interaction networks has been accompanied by several efforts to model and understand these data at different scales. A key multiscale network…
Blockmodels are a foundational tool for modeling community structure in networks, with the stochastic blockmodel (SBM), degree-corrected blockmodel (DCBM), and popularity-adjusted blockmodel (PABM) forming a natural hierarchy of increasing…
Clustering and community detection with multiple graphs have typically focused on aligned graphs, where there is a mapping between nodes across the graphs (e.g., multi-view, multi-layer, temporal graphs). However, there are numerous…
Generating high-quality synthetic networks with realistic community structure is vital to effectively evaluate community detection algorithms. In this study, we propose a new synthetic network generator called the Edge-Connected Stochastic…
The stochastic block model is one of the oldest and most ubiquitous models for studying clustering and community detection. In an exciting sequence of developments, motivated by deep but non-rigorous ideas from statistical physics, Decelle…
In this paper, we introduce a hierarchical extension of the stochastic blockmodel to identify multilevel community structures in networks. We also present a Markov chain Monte Carlo (MCMC) and a variational Bayes algorithm to fit the model…