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Molecular property calculations are the bedrock of chemical physics. High-fidelity \textit{ab initio} modeling techniques for computing the molecular properties can be prohibitively expensive, and motivate the development of…

Machine Learning · Computer Science 2022-11-28 Hatem Helal , Jesun Firoz , Jenna Bilbrey , Mario Michael Krell , Tom Murray , Ang Li , Sotiris Xantheas , Sutanay Choudhury

Few-shot algorithms aim at learning new tasks provided only a handful of training examples. In this work we investigate few-shot learning in the setting where the data points are sequences of tokens and propose an efficient learning…

Machine Learning · Computer Science 2020-12-18 Lajanugen Logeswaran , Ann Lee , Myle Ott , Honglak Lee , Marc'Aurelio Ranzato , Arthur Szlam

Few-shot learning aims at rapidly adapting to novel categories with only a handful of samples at test time, which has been predominantly tackled with the idea of meta-learning. However, meta-learning approaches essentially learn across a…

Computer Vision and Pattern Recognition · Computer Science 2021-07-21 Jinhai Yang , Hua Yang , Lin Chen

Ground-state 3D geometries of molecules are essential for many molecular analysis tasks. Modern quantum mechanical methods can compute accurate 3D geometries but are computationally prohibitive. Currently, an efficient alternative to…

Chemical Physics · Physics 2023-05-24 Zhao Xu , Yaochen Xie , Youzhi Luo , Xuan Zhang , Xinyi Xu , Meng Liu , Kaleb Dickerson , Cheng Deng , Maho Nakata , Shuiwang Ji

Over the past few years, there has been a significant improvement in the domain of few-shot learning. This learning paradigm has shown promising results for the challenging problem of anomaly detection, where the general task is to deal…

Computer Vision and Pattern Recognition · Computer Science 2022-11-24 Soumyajit Karmakar , Abeer Banerjee , Prashant Sadashiv Gidde , Sumeet Saurav , Sanjay Singh

I present a strategy for unsupervised manifold learning on local atomic environments in molecular simulations based on simple rotation- and permutation-invariant three-body features. These features are highly descriptive, generalize to…

Materials Science · Physics 2023-01-03 Wesley F. Reinhart

Large language models manifest the ability of few-shot adaptation to a sequence of provided examples. This behavior, known as in-context learning, allows for performing nontrivial machine learning tasks during inference only. In this work,…

Few-shot learning is a rapidly evolving area of research in machine learning where the goal is to classify unlabeled data with only one or "a few" labeled exemplary samples. Neural networks are typically trained to minimize a distance…

Computer Vision and Pattern Recognition · Computer Science 2022-12-09 Samuel Hess , Gregory Ditzler

Machine learning (ML) is a promising approach for predicting small molecule properties in drug discovery. Here, we provide a comprehensive overview of various ML methods introduced for this purpose in recent years. We review a wide range of…

Biomolecules · Quantitative Biology 2023-08-25 Nikolai Schapin , Maciej Majewski , Alejandro Varela , Carlos Arroniz , Gianni De Fabritiis

The precise prediction of molecular properties is essential for advancements in drug development, particularly in virtual screening and compound optimization. The recent introduction of numerous deep learning-based methods has shown…

Machine Learning · Computer Science 2024-07-01 Taojie Kuang , Pengfei Liu , Zhixiang Ren

Despite deep convolutional neural networks achieved impressive progress in medical image computing and analysis, its paradigm of supervised learning demands a large number of annotations for training to avoid overfitting and achieving…

Computer Vision and Pattern Recognition · Computer Science 2020-12-11 Liyan Sun , Chenxin Li , Xinghao Ding , Yue Huang , Guisheng Wang , Yizhou Yu

Few-shot learning has recently attracted significant interest in drug discovery, with a recent, fast-growing literature mostly involving convoluted meta-learning strategies. We revisit the more straightforward fine-tuning approach for…

Machine Learning · Computer Science 2025-02-10 Philippe Formont , Hugo Jeannin , Pablo Piantanida , Ismail Ben Ayed

Deep-embedding methods aim to discover representations of a domain that make explicit the domain's class structure and thereby support few-shot learning. Disentangling methods aim to make explicit compositional or factorial structure. We…

Machine Learning · Computer Science 2018-05-22 Karl Ridgeway , Michael C. Mozer

A key characteristic of deep recommendation models is the immense memory requirements of their embedding tables. These embedding tables can often reach hundreds of gigabytes which increases hardware requirements and training cost. A common…

Few-shot learning aims at leveraging knowledge learned by one or more deep learning models, in order to obtain good classification performance on new problems, where only a few labeled samples per class are available. Recent years have seen…

Machine Learning · Computer Science 2022-02-08 Yassir Bendou , Yuqing Hu , Raphael Lafargue , Giulia Lioi , Bastien Pasdeloup , Stéphane Pateux , Vincent Gripon

Current few-shot learning models capture visual object relations in the so-called meta-learning setting under a fixed-resolution input. However, such models have a limited generalization ability under the scale and location mismatch between…

Computer Vision and Pattern Recognition · Computer Science 2022-10-11 Hongguang Zhang , Philip H. S. Torr , Piotr Koniusz

Large pre-trained language models (LLMs) have been shown to have significant potential in few-shot learning across various fields, even with minimal training data. However, their ability to generalize to unseen tasks in more complex fields,…

Computation and Language · Computer Science 2023-04-24 Tianhao Li , Sandesh Shetty , Advaith Kamath , Ajay Jaiswal , Xianqian Jiang , Ying Ding , Yejin Kim

In recent years the machine learning techniques have shown a great potential in various problems from a multitude of disciplines, including materials design and drug discovery. The high computational speed on the one hand and the accuracy…

Chemical Physics · Physics 2018-05-09 Konstantin Gubaev , Evgeny V. Podryabinkin , Alexander V. Shapeev

With the consolidation of deep learning in drug discovery, several novel algorithms for learning molecular representations have been proposed. Despite the interest of the community in developing new methods for learning molecular embeddings…

Biomolecules · Quantitative Biology 2022-05-09 María Virginia Sabando , Ignacio Ponzoni , Evangelos E. Milios , Axel J. Soto

We present a compositional embedding framework that infers not just a single class per input image, but a set of classes, in the setting of one-shot learning. Specifically, we propose and evaluate several novel models consisting of (1) an…

Machine Learning · Computer Science 2020-11-16 Zeqian Li , Michael C. Mozer , Jacob Whitehill
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