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Modern biology and biomedicine are undergoing a big-data explosion needing advanced computational algorithms to extract mechanistic insights on the physiological state of living cells. We present the motivation for the Cell Physiome: a…

Cell Behavior · Quantitative Biology 2022-03-08 Vijay Rajagopal , Senthil Arumugam , Peter Hunter , Afshin Khadangi , Joshua Chung , Michael Pan

The increasing digitization of medical imaging enables machine learning based improvements in detecting, visualizing and segmenting lesions, easing the workload for medical experts. However, supervised machine learning requires reliable…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Maximilian E. Tschuchnig , Michael Gadermayr

Cell image classification methods are currently being used in numerous applications in cell biology and medicine. Applications include understanding the effects of genes and drugs in screening experiments, understanding the role and…

Quantitative Methods · Quantitative Biology 2022-03-04 Mohammad Shifat-E-Rabbi , Xuwang Yin , Cailey Elizabeth Fitzgerald , Gustavo K. Rohde

Deep learning-based medical image-to-mesh reconstruction has rapidly evolved, enabling the transformation of medical imaging data into three-dimensional mesh models that are critical in computational medicine and in silico trials for…

Computer Vision and Pattern Recognition · Computer Science 2025-05-07 Fengming Lin , Arezoo Zakeri , Yidan Xue , Michael MacRaild , Haoran Dou , Zherui Zhou , Ziwei Zou , Ali Sarrami-Foroushani , Jinming Duan , Alejandro F. Frangi

The rapid development of diagnostic technologies in healthcare is leading to higher requirements for physicians to handle and integrate the heterogeneous, yet complementary data that are produced during routine practice. For instance, the…

Machine Learning · Computer Science 2023-01-30 Can Cui , Haichun Yang , Yaohong Wang , Shilin Zhao , Zuhayr Asad , Lori A. Coburn , Keith T. Wilson , Bennett A. Landman , Yuankai Huo

Digital Photo images are everywhere, on the covers of magazines, in newspapers, in courtrooms, and all over the Internet. We are exposed to them throughout the day and most of the time. Ease with which images can be manipulated; we need to…

Computer Vision and Pattern Recognition · Computer Science 2013-02-14 S. Murali , Govindraj B. Chittapur , Prabhakara H. S , Basavaraj S. Anami

As computer vision algorithms increase in capability, their applications in clinical systems will become more pervasive. These applications include: diagnostics, such as colonoscopy and bronchoscopy; guiding biopsies, minimally invasive…

Computer Vision and Pattern Recognition · Computer Science 2024-03-05 Adam Schmidt , Omid Mohareri , Simon DiMaio , Michael C. Yip , Septimiu E. Salcudean

Multimodal image fusion aims to combine relevant information from images acquired with different sensors. In medical imaging, fused images play an essential role in both standard and automated diagnosis. In this paper, we propose a novel…

Computer Vision and Pattern Recognition · Computer Science 2021-02-18 Farshad G. Veshki , Nora Ouzir , Sergiy A. Vorobyov , Esa Ollila

With the advent of smartphone indirect ophthalmoscopy, teleophthalmology - the use of specialist ophthalmology assets at a distance from the patient - has experienced a breakthrough, promising enormous benefits especially for healthcare in…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Chris von Csefalvay

Biomedical imaging is unequivocally dependent on the ability to reconstruct interpretable and high-quality images from acquired sensor data. This reconstruction process is pivotal across many applications, spanning from magnetic resonance…

Signal Processing · Electrical Eng. & Systems 2019-09-24 Ben Luijten , Regev Cohen , Frederik J. de Bruijn , Harold A. W. Schmeitz , Massimo Mischi , Yonina C. Eldar , Ruud J. G. van Sloun

Recording and identifying faint objects through atmospheric scattering media by an optical system are fundamentally interesting and technologically important. In this work, we introduce a comprehensive model that incorporates contributions…

Optics · Physics 2024-04-24 Libang Chen , Jun Yang , Lingye Chen , Yuyang Shui , Yikun Liu , Jianying Zhou

The role and importance of mechanical properties of cells and tissues in cellular function, development as well as disease has widely been acknowledged, however standard techniques currently used to assess them exhibit intrinsic…

Biological Physics · Physics 2019-01-09 Robert Prevedel , Alba Diz-Muñoz , Giancarlo Ruocco , Giuseppe Antonacci

The physiological tradition of biological research analyzes biological systems using reduced descriptions much as an engineer uses a 'black box' description of an amplifier. Simple models have been used by physiologists for a very long…

Other Quantitative Biology · Quantitative Biology 2012-07-06 Bob Eisenberg

Face recognition from image or video is a popular topic in biometrics research. Many public places usually have surveillance cameras for video capture and these cameras have their significant value for security purpose. It is widely…

Computer Vision and Pattern Recognition · Computer Science 2013-02-27 Faizan Ahmad , Aaima Najam , Zeeshan Ahmed

Transmission imaging, as an important imaging technique widely used in astronomy, medical diagnosis, and biology science, has been shown in [49] quite different from reflection imaging used in our everyday life. Understanding the structures…

Differential Geometry · Mathematics 2014-01-09 Zhitao Fan , Feng Guan , Chunlin Wu , Ming Yan

Medical imaging is an important research field with many opportunities for improving patients' health. However, there are a number of challenges that are slowing down the progress of the field as a whole, such optimizing for publication. In…

Image and Video Processing · Electrical Eng. & Systems 2022-05-14 Gaël Varoquaux , Veronika Cheplygina

Medical image segmentation is crucial for accurate clinical diagnoses, yet it faces challenges such as low contrast between lesions and normal tissues, unclear boundaries, and high variability across patients. Deep learning has improved…

Image and Video Processing · Electrical Eng. & Systems 2024-12-09 Houze Liu , Tong Zhou , Yanlin Xiang , Aoran Shen , Jiacheng Hu , Junliang Du

Although the preservation of shape continuity and physiological anatomy is a natural assumption in the segmentation of medical images, it is often neglected by deep learning methods that mostly aim for the statistical modeling of input data…

Computer Vision and Pattern Recognition · Computer Science 2023-05-01 Yousef Yeganeh , Azade Farshad , Goktug Guevercin , Amr Abu-zer , Rui Xiao , Yongjian Tang , Ehsan Adeli , Nassir Navab

Recent developments of new medical treatment techniques put challenging demands on ultrasound imaging systems in terms of both image quality and raw data size. Traditional sampling methods result in very large amounts of data, thus,…

Information Theory · Computer Science 2011-04-29 Noam Wagner , Yonina C. Eldar , Arie Feuer , Gilad Danin , Zvi Friedman

Quantum optics potentially offers an information channel from the Universe beyond the established ones of imaging and spectroscopy. All existing cameras and all spectrometers measure aspects of the first-order spatial and/or temporal…

Astrophysics · Physics 2015-06-24 Dainis Dravins
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