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Pulmonary diseases rank prominently among the principal causes of death worldwide. Curing them will require, among other things, a better understanding of the complex 3D tree-shaped structures within the pulmonary system, such as airways,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-21 Kangxian Xie , Jiancheng Yang , Donglai Wei , Ziqiao Weng , Pascal Fua

In this work, we propose to use a local clustering approach based on the sparse solution technique to study the medical image, especially the lung cancer image classification task. We view images as the vertices in a weighted graph and the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-22 Jackson Hamel , Ming-Jun Lai , Zhaiming Shen , Ye Tian

Community detection is a central task in graph analytics. Given the substantial growth in graph size, scalability in community detection continues to be an unresolved challenge. Recently, alongside established methods like Louvain and…

Social and Information Networks · Computer Science 2024-12-18 Tianyi Chen , Charalampos E. Tsourakakis

The notion of graph covers (also referred to as locally bijective homomorphisms) plays an important role in topological graph theory and has found its computer science applications in models of local computation. For a fixed target graph…

Discrete Mathematics · Computer Science 2025-02-28 Jan Bok , Jiří Fiala , Nikola Jedličková , Jan Kratochvíl , Micheala Seifrtová

The problem of finding the vertex correspondence between two noisy graphs with different number of vertices where the smaller graph is still large has many applications in social networks, neuroscience, and computer vision. We propose a…

Machine Learning · Statistics 2019-07-03 Daniel L. Sussman , Youngser Park , Carey E. Priebe , Vince Lyzinski

Recently brain networks have been widely adopted to study brain dynamics, brain development and brain diseases. Graph representation learning techniques on brain functional networks can facilitate the discovery of novel biomarkers for…

Machine Learning · Computer Science 2022-07-19 Haoteng Tang , Guixiang Ma , Lei Guo , Xiyao Fu , Heng Huang , Liang Zhang

Given two graphs, the graph matching problem is to align the two vertex sets so as to minimize the number of adjacency disagreements between the two graphs. The seeded graph matching problem is the graph matching problem when we are first…

We propose new image forgery detection and localization algorithms by recasting these problems as graph-based community detection problems. To do this, we introduce a novel abstract, graph-based representation of an image, which we call the…

Image and Video Processing · Electrical Eng. & Systems 2023-07-19 Owen Mayer , Matthew C. Stamm

One of the greatest scientific challenges in network neuroscience is to create a representative map of a population of heterogeneous brain networks, which acts as a connectional fingerprint. The connectional brain template (CBT), also named…

Neurons and Cognition · Quantitative Biology 2022-04-12 Nada Chaari , Hatice Camgoz Akdag , Islem Rekik

Background: Biological data often originate from samples containing mixtures of subpopulations, corresponding e.g. to distinct cellular phenotypes. However, identification of distinct subpopulations may be difficult if biological…

Graphics · Computer Science 2014-07-09 Justin Feigelman , Fabian J. Theis , Carsten Marr

In neuroimaging, a large number of correlated tests are routinely performed to detect active voxels in single-subject experiments or to detect regions that differ between individuals belonging to different groups. In order to bound the…

Supervised learning on graphs is a challenging task due to the high dimensionality and inherent structural dependencies in the data, where each edge depends on a pair of vertices. Existing conventional methods are designed for standard…

Methodology · Statistics 2024-06-27 Cencheng Shen , Shangsi Wang , Alexandra Badea , Carey E. Priebe , Joshua T. Vogelstein

We are interested in multilayer graph clustering, which aims at dividing the graph nodes into categories or communities. To do so, we propose to learn a clustering-friendly embedding of the graph nodes by solving an optimization problem…

Machine Learning · Computer Science 2021-03-31 Mireille El Gheche , Pascal Frossard

Robotic and animal mapping systems share many of the same objectives and challenges, but differ in one key aspect: where much of the research in robotic mapping has focused on solving the data association problem, the grid cell neurons…

Computer Vision and Pattern Recognition · Computer Science 2018-10-24 Huu Le , Michael Milford

The enumeration of chemical graphs is an important topic in cheminformatics and bioinformatics, particularly in the discovery of novel drugs. These graphs are typically either tree-like multigraphs or composed of tree-like multigraphs…

Discrete Mathematics · Computer Science 2025-02-11 Muhammad Ilyas , Seemab Hayat , Naveed Ahmed Azam

Graphs are quickly emerging as a leading abstraction for the representation of data. One important application domain originates from an emerging discipline called "connectomics". Connectomics studies the brain as a graph; vertices…

Skeleton-based person re-identification (Re-ID) is an emerging open topic providing great value for safety-critical applications. Existing methods typically extract hand-crafted features or model skeleton dynamics from the trajectory of…

Computer Vision and Pattern Recognition · Computer Science 2021-06-08 Haocong Rao , Shihao Xu , Xiping Hu , Jun Cheng , Bin Hu

For data represented by networks, the community structure of the underlying graph is of great interest. A classical clustering problem is to uncover the overall ``best'' partition of nodes in communities. Here, a more elaborate description…

Physics and Society · Physics 2013-11-11 Nicolas Tremblay , Pierre Borgnat

Current brain surface-based prediction models often overlook the variability of regional attributes at the cortical feature level. While graph neural networks (GNNs) excel at capturing regional differences, they encounter challenges when…

Neurons and Cognition · Quantitative Biology 2024-11-12 Zhuoshuo Li , Jiong Zhang , Youbing Zeng , Jiaying Lin , Dan Zhang , Jianjia Zhang , Duan Xu , Hosung Kim , Bingguang Liu , Mengting Liu

Challenges of assessing complexity and clonality in populations of mixed species arise in diverse areas of modern biology, including estimating diversity and clonality in microbiome populations, measuring patterns of T and B cell clonality,…

Methodology · Statistics 2014-08-07 Yi Liu , Andrew Z. Fire , Scott Boyd , Richard A. Olshen