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Brain tumors are a challenging problem in neuro-oncology, where early and precise diagnosis is important for successful treatment. Deep learning-based brain tumor classification methods often rely on heavy data augmentation which can limit…

Machine Learning · Computer Science 2026-04-20 Saraf Anzum Shreya , MD. Abu Ismail Siddique , Sharaf Tasnim

Functional ultrasound imaging (fUSI) is a cutting-edge technology that measures changes in cerebral blood volume (CBV) by detecting backscattered echoes from red blood cells moving within its field of view (FOV). It offers high…

Neurons and Cognition · Quantitative Biology 2025-08-20 Jared Deighton , Shan Zhong , Kofi Agyeman , Wooseong Choi , Charles Liu , Darrin Lee , Vasileios Maroulas , Vasileios Christopoulos

We present a deep learning framework with two models for automated segmentation and large-scale flow phenotyping in a registry of single-ventricle patients. MultiFlowSeg simultaneously classifies and segments five key vessels, left and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-03 Tina Yao , Nicole St. Clair , Madeline Gong , Gabriel F. Miller , Jennifer A. Steeden , Rahul H. Rathod , Vivek Muthurangu , FORCE Investigators

Atrial fibrillation (AF) is a prevalent cardiac arrhythmia associated with elevated health risks, where timely detection is pivotal for mitigating stroke-related morbidity. This study introduces an innovative hybrid methodology integrating…

Machine Learning · Computer Science 2025-10-08 Alireza Jafari , Fereshteh Yousefirizi , Vahid Seydi

Myocardial characterization is essential for patients with myocardial infarction and other myocardial diseases, and the assessment is often performed using cardiac magnetic resonance (CMR) sequences. In this study, we propose a fully…

Image and Video Processing · Electrical Eng. & Systems 2020-08-19 Xiaoran Zhang , Michelle Noga , Kumaradevan Punithakumar

Tracking cells in 3D at high speed continues to attract extensive attention for many biomedical applications, such as monitoring immune cell migration and observing tumor metastasis in flowing blood vessels. Here, we propose a deep…

Optics · Physics 2018-05-16 Kan Liu , Hui Qiao , Jiamin Wu , Haoqian Wang , Lu Fang , Qionghai Dai

While deep learning holds great promise for disease diagnosis and prognosis in cardiac magnetic resonance imaging, its progress is often constrained by highly imbalanced and biased training datasets. To address this issue, we propose a…

Image and Video Processing · Electrical Eng. & Systems 2025-09-09 Grzegorz Skorupko , Richard Osuala , Zuzanna Szafranowska , Kaisar Kushibar , Vien Ngoc Dang , Nay Aung , Steffen E Petersen , Karim Lekadir , Polyxeni Gkontra

Cardiac Magnetic Resonance (CMR) is established as a non-invasive imaging technique for evaluation of heart function, anatomy, and myocardial tissue characterization. Quantitative biomarkers are central for diagnosis and management of heart…

Image and Video Processing · Electrical Eng. & Systems 2024-04-04 Hui Xue , Rhodri H Davies , James Howard , Hunain Shiwani , Azaan Rehman , Iain Pierce , Henry Procter , Marianna Fontana , James C Moon , Eylem Levelt , Peter Kellman

We describe a novel cancer diagnostic method based on plasma denaturation profiles obtained by a non-conventional use of Differential Scanning Fluorimetry. We show that 84 glioma patients and 63 healthy controls can be automatically…

Fluorescence correlation and cross-correlation spectroscopy (FCS, FCCS) are widely used techniques to study the diffusion properties and interactions of fluorescent molecules. Autocorrelation (ACFs) and cross-correlation functions (CCFs)…

Real-time monitoring of dynamic biological processes in the body is critical to understanding disease progression and treatment response. This data, for instance, can help address the lower than 50% response rates to cancer immunotherapy.…

Coronary artery disease, caused by the narrowing of coronary vessels due to atherosclerosis, is the leading cause of death worldwide. The diagnostic gold standard, fractional flow reserve (FFR), measures the trans-stenotic pressure ratio…

Image and Video Processing · Electrical Eng. & Systems 2025-01-24 Guido Nannini , Julian Suk , Patryk Rygiel , Simone Saitta , Luca Mariani , Riccardo Maragna , Andrea Baggiano , Gianluca Pontone , Jelmer M. Wolterink , Alberto Redaelli

Atrial fibrillation (AF) is a common arrhythmia and major risk factor for cardiovascular complications. While commercially available devices and supporting Artificial Intelligence (AI) algorithms exist for reliable detection of AF, the…

Hardware Architecture · Computer Science 2025-08-20 Dominik Loroch , Johannes Feldmann , Vladimir Rybalkin , Norbert Wehn

LiDAR sensors have been widely used in many autonomous vehicle modalities, such as perception, mapping, and localization. This paper presents an FPGA-based deep learning platform for real-time point cloud processing targeted on autonomous…

Signal Processing · Electrical Eng. & Systems 2020-06-02 Lin Bai , Yecheng Lyu , Xin Xu , Xinming Huang

Tissue tracking in echocardiography is challenging due to the complex cardiac motion and the inherent nature of ultrasound acquisitions. Although optical flow methods are considered state-of-the-art (SOTA), they struggle with long-range…

Computer Vision and Pattern Recognition · Computer Science 2024-05-15 Md Abulkalam Azad , Artem Chernyshov , John Nyberg , Ingrid Tveten , Lasse Lovstakken , Håvard Dalen , Bjørnar Grenne , Andreas Østvik

Reliable large-scale cell detection and segmentation is the fundamental first step to understanding biological processes in the brain. The ability to phenotype cells at scale can accelerate preclinical drug evaluation and system-level brain…

Computer Vision and Pattern Recognition · Computer Science 2023-01-03 Son T. Ly , Bai Lin , Hung Q. Vo , Dragan Maric , Badri Roysam , Hien V. Nguyen

Assessing coronary artery plaque segments in coronary CT angiography scans is an important task to improve patient management and clinical outcomes, as it can help to decide whether invasive investigation and treatment are necessary. In…

The coagulation of blood after it is drawn from the body poses a significant challenge for hematological analysis, potentially leading to inaccurate test results and altered cellular characteristics, compromising diagnostic reliability.…

We introduce SparseVM, a method that registers clinical-quality 3D MR scans both faster and more accurately than previously possible. Deformable alignment, or registration, of clinical scans is a fundamental task for many clinical…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Kathleen M. Lewis , Natalia S. Rost , John Guttag , Adrian V. Dalca

In this paper, we proposed two different approaches, a rule-based approach and a machine-learning based approach, to identify active heart failure cases automatically by analyzing electronic health records (EHR). For the rule-based…

Computation and Language · Computer Science 2016-09-07 Shu Dong , R Kannan Mutharasan , Siddhartha Jonnalagadda