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Graph convolutional networks (GCNs) have recently become one of the most powerful tools for graph analytics tasks in numerous applications, ranging from social networks and natural language processing to bioinformatics and chemoinformatics,…

Machine Learning · Computer Science 2019-04-05 Fengwen Chen , Shirui Pan , Jing Jiang , Huan Huo , Guodong Long

Graph Convolutional Networks (GCNs) have shown very powerful for graph data representation and learning tasks. Existing GCNs usually conduct feature aggregation on a fixed neighborhood graph in which each node computes its representation by…

Computer Vision and Pattern Recognition · Computer Science 2019-11-21 Bo Jiang , Beibei Wang , Jin Tang , Bin Luo

Since heterogeneity presents a fundamental challenge in graph federated learning, many existing methods are proposed to deal with node feature heterogeneity and structure heterogeneity. However, they overlook the critical homophily…

Machine Learning · Computer Science 2025-02-20 Wentao Yu

In many important graph data processing applications the acquired information includes both node features and observations of the graph topology. Graph neural networks (GNNs) are designed to exploit both sources of evidence but they do not…

Machine Learning · Computer Science 2021-10-28 Eli Chien , Jianhao Peng , Pan Li , Olgica Milenkovic

Graph clustering is a fundamental task in graph analysis, and recent advances in utilizing graph neural networks (GNNs) have shown impressive results. Despite the success of existing GNN-based graph clustering methods, they often overlook…

Machine Learning · Computer Science 2023-10-31 Ming Gu , Gaoming Yang , Sheng Zhou , Ning Ma , Jiawei Chen , Qiaoyu Tan , Meihan Liu , Jiajun Bu

While Graph Neural Networks (GNNs) have achieved enormous success in multiple graph analytical tasks, modern variants mostly rely on the strong inductive bias of homophily. However, real-world networks typically exhibit both homophilic and…

Machine Learning · Computer Science 2024-09-18 Jingwei Guo , Kaizhu Huang , Rui Zhang , Xinping Yi

Graph heterophily poses a formidable challenge to the performance of Message-passing Graph Neural Networks (MP-GNNs). The familiar low-pass filters like Graph Convolutional Networks (GCNs) face performance degradation, which can be…

Machine Learning · Computer Science 2025-09-17 Kushal Bose , Swagatam Das

Conventional graph neural networks (GNNs) are often confronted with fairness issues that may stem from their input, including node attributes and neighbors surrounding a node. While several recent approaches have been proposed to eliminate…

Machine Learning · Computer Science 2023-02-21 Zemin Liu , Trung-Kien Nguyen , Yuan Fang

Graphs are structured data that models complex relations between real-world entities. Heterophilic graphs, where linked nodes are prone to be with different labels or dissimilar features, have recently attracted significant attention and…

Social and Information Networks · Computer Science 2025-03-21 Chenghua Gong , Yao Cheng , Jianxiang Yu , Can Xu , Caihua Shan , Siqiang Luo , Xiang Li

Graph Neural Networks (GNNs) struggle to balance heterophily and homophily in representation learning, a challenge further amplified in self-supervised settings. We propose H$^3$GNNs, an end-to-end self-supervised learning framework that…

Machine Learning · Computer Science 2025-04-17 Rui Xue , Tianfu Wu

With the widespread use of Graph Neural Networks (GNNs) for representation learning from network data, the fairness of GNN models has raised great attention lately. Fair GNNs aim to ensure that node representations can be accurately…

Social and Information Networks · Computer Science 2024-10-23 Guixian Zhang , Guan Yuan , Debo Cheng , Lin Liu , Jiuyong Li , Shichao Zhang

Homophily, the tendency of nodes from the same class to connect, is a fundamental property of real-world graphs, underpinning structural and semantic patterns in domains such as citation networks and social networks. Existing methods…

Machine Learning · Computer Science 2025-10-28 Yan Jiang , Ruihong Qiu , Zi Huang

Graph neural networks (GNNs) realize great success in graph learning but suffer from performance loss when meeting heterophily, i.e. neighboring nodes are dissimilar, due to their local and uniform aggregation. Existing attempts of…

Machine Learning · Computer Science 2026-04-14 Haoyu Liu , Ningyi Liao , Siqiang Luo

While Graph Neural Network (GNN) has shown superiority in learning node representations of homogeneous graphs, leveraging GNN on heterogeneous graphs remains a challenging problem. The dominating reason is that GNN learns node…

Social and Information Networks · Computer Science 2020-09-22 Ziyue Qiao , Pengyang Wang , Yanjie Fu , Yi Du , Pengfei Wang , Yuanchun Zhou

Graph anomaly detection aims to identify irregular patterns in graph-structured data. Most unsupervised GNN-based methods rely on the homophily assumption that connected nodes share similar attributes. However, real-world graphs often…

Machine Learning · Computer Science 2026-04-20 Zehao Wang , Lanjun Wang

Graph Neural Networks (GNNs) are a promising deep learning approach for circumventing many real-world problems on graph-structured data. However, these models usually have at least one of four fundamental limitations: over-smoothing,…

Machine Learning · Computer Science 2022-10-03 Xun Liu , Alex Hay-Man Ng , Fangyuan Lei , Yikuan Zhang , Zhengmin Li

Graph Convolutional Networks (GCNs) are powerful models for node representation learning tasks. However, the node representation in existing GCN models is usually generated by performing recursive neighborhood aggregation across multiple…

Machine Learning · Computer Science 2021-05-11 Hao Chen , Zengde Deng , Yue Xu , Zhoujun Li

Node classification on graphs is a significant task with a wide range of applications, including social analysis and anomaly detection. Even though graph neural networks (GNNs) have produced promising results on this task, current…

Machine Learning · Computer Science 2023-06-16 Jingyang Yuan , Xiao Luo , Yifang Qin , Yusheng Zhao , Wei Ju , Ming Zhang

Graph neural networks (GNNs) have shown promise in addressing graph-related problems, including node classification. However, conventional GNNs assume an even distribution of data across classes, which is often not the case in real-world…

Machine Learning · Computer Science 2023-10-16 Zirui Liang , Yuntao Li , Tianjin Huang , Akrati Saxena , Yulong Pei , Mykola Pechenizkiy

While heterophily has been widely studied in node-level tasks, its impact on graph-level tasks remains unclear. We present the first analysis of heterophily in graph-level learning, combining theoretical insights with empirical validation.…

Machine Learning · Computer Science 2025-09-24 Qinhan Hou , Yilun Zheng , Xichun Zhang , Sitao Luan , Jing Tang
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