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A graph generative model defines a distribution over graphs. One type of generative model is constructed by autoregressive neural networks, which sequentially add nodes and edges to generate a graph. However, the likelihood of a graph under…

Machine Learning · Statistics 2021-06-15 Xiaohui Chen , Xu Han , Jiajing Hu , Francisco J. R. Ruiz , Liping Liu

Modeling generative process of growing graphs has wide applications in social networks and recommendation systems, where cold start problem leads to new nodes isolated from existing graph. Despite the emerging literature in learning graph…

Machine Learning · Computer Science 2019-06-03 Da Xu , Chuanwei Ruan , Kamiya Motwani , Evren Korpeoglu , Sushant Kumar , Kannan Achan

As a quantification of the main bottleneck to flow over a graph, the network property of conductance plays an important role in the process of synchronization of network-coupled dynamical systems. Diffusive coupling terms serve not only to…

Physics and Society · Physics 2025-10-29 C. Tyler Diggans

In this paper, we propose Graph Retention Networks (GRNs) as a unified architecture for deep learning on dynamic graphs. The GRN extends the concept of retention into dynamic graph data as graph retention, equipping the model with three key…

Machine Learning · Computer Science 2026-04-14 Qian Chang , Xia Li , Xiufeng Cheng , Runsong Jia , Jinqing Yang , Guoping Hu , Ciprian Doru Giurcaneanu

There is a deep and interesting connection between the topological properties of a graph and the behaviour of the dynamical system defined on it. We analyse various kind of graphs, with different contrasting connectivity or degree…

Combinatorics · Mathematics 2017-05-01 Barbara Giunti , Vincenzo Perri

Graph Neural Networks (GNNs) have been widely used for modeling graph-structured data. With the development of numerous GNN variants, recent years have witnessed groundbreaking results in improving the scalability of GNNs to work on static…

Machine Learning · Computer Science 2022-06-06 Yanping Zheng , Hanzhi Wang , Zhewei Wei , Jiajun Liu , Sibo Wang

Graph generation with Machine Learning is an open problem with applications in various research fields. In this work, we propose to cast the generative process of a graph into a sequential one, relying on a node ordering procedure. We use…

Machine Learning · Statistics 2020-04-24 Davide Bacciu , Alessio Micheli , Marco Podda

Symmetry is an important aesthetic criteria in graph drawing and network visualisation. Symmetric graph drawings aim to faithfully represent automorphisms of graphs as geometric symmetries in a drawing. In this paper, we design and…

Data Structures and Algorithms · Computer Science 2019-10-14 Amyra Meidiana , Seok-Hee Hong , Peter Eades , Daniel Keim

Inspired by theories such as Loop Quantum Gravity, a class of stochastic graph dynamics was studied in an attempt to gain a better understanding of discrete relational systems under the influence of local dynamics. Unlabeled graphs in a…

High Energy Physics - Theory · Physics 2007-05-23 Hal Finkel

Generating graphs that preserve characteristic structures while promoting sample diversity can be challenging, especially when the number of graph observations is small. Here, we tackle the problem of graph generation from only one observed…

Machine Learning · Statistics 2024-04-08 Gesine Reinert , Wenkai Xu

We propose a combination of a variational autoencoder and a transformer based model which fully utilises graph convolutional and graph pooling layers to operate directly on graphs. The transformer model implements a novel node encoding…

Machine Learning · Computer Science 2021-04-12 Joshua Mitton , Hans M. Senn , Klaas Wynne , Roderick Murray-Smith

Understanding network structure and having access to realistic graphs plays a central role in computer and social networks research. In this paper, we propose a complete, and practical methodology for generating graphs that resemble a real…

Social and Information Networks · Computer Science 2012-08-21 Minas Gjoka , Maciej Kurant , Athina Markopoulou

Built upon the shoulders of graph theory, the field of complex networks has become a central tool for studying real systems across various fields of research. Represented as graphs, different systems can be studied using the same analysis…

Physics and Society · Physics 2024-05-30 Gorka Zamora-López , Matthieu Gilson

Graph Neural Networks (GNN) rely on graph convolutions to learn features from network data. GNNs are stable to different types of perturbations of the underlying graph, a property that they inherit from graph filters. In this paper we…

Machine Learning · Computer Science 2022-02-11 Juan Cervino , Luana Ruiz , Alejandro Ribeiro

Presenting long sequences of dynamic graphs remains challenging due to the underlying large-scale and high-dimensional data. We propose dg2pix, a novel pixel-based visualization technique, to visually explore temporal and structural…

Human-Computer Interaction · Computer Science 2020-09-17 Eren Cakmak , Dominik Jäckle , Tobias Schreck , Daniel Keim

Generative modeling of graphs with spatial structure is essential across many applications from computer graphics to spatial genomics. Recent flow-based generative models have achieved impressive results by gradually adding and then…

Machine Learning · Computer Science 2025-07-15 Peter Pao-Huang , Mitchell Black , Xiaojie Qiu

Graph Neural Networks (GNNs) have become the standard for graph representation learning but remain vulnerable to structural perturbations. We propose a novel framework that integrates persistent homology features with stability…

Machine Learning · Computer Science 2025-12-17 Jelena Losic

Previous studies have inferred robust stability of reaction networks by utilizing linear programs or iterative algorithms. Such algorithms become tedious or computationally infeasible for large networks. In addition, they operate like…

Optimization and Control · Mathematics 2023-02-13 M. Ali Al-Radhawi

Dynamic temporal graphs represent evolving relations between entities, e.g. interactions between social network users or infection spreading. We propose an extension of graph echo state networks for the efficient processing of dynamic…

Machine Learning · Computer Science 2022-10-31 Domenico Tortorella , Alessio Micheli

A graph theoretic perspective is taken for a range of phenomena in continuum physics in order to develop representations for analysis of large scale, high-fidelity solutions to these problems. Of interest are phenomena described by partial…

Computational Physics · Physics 2019-05-22 R. Banerjee , K. Sagiyama , G. H. Teichert , K. Garikipati
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