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Can neural networks learn to compare graphs without feature engineering? In this paper, we show that it is possible to learn representations for graph similarity with neither domain knowledge nor supervision (i.e.\ feature engineering or…

Machine Learning · Computer Science 2019-04-23 Rami Al-Rfou , Dustin Zelle , Bryan Perozzi

Fractional graph isomorphism is the linear relaxation of an integer programming formulation of graph isomorphism. It preserves some invariants of graphs, like degree sequences and equitable partitions, but it does not preserve others like…

Combinatorics · Mathematics 2020-08-20 Flavia Bonomo-Braberman , Dora Tilli

A common assumption in semi-supervised learning with graph models is that the class label function varies smoothly on the data graph, resulting in the rather strict prior that the label function has low-frequency content. Meanwhile, in many…

Machine Learning · Statistics 2020-02-05 Mehmet Pilanci , Elif Vural

Many real-world problems can be represented as graph-based learning problems. In this paper, we propose a novel framework for learning spatial and attentional convolution neural networks on arbitrary graphs. Different from previous…

Machine Learning · Computer Science 2019-02-26 Hao Peng , Jianxin Li , Qiran Gong , Senzhang Wang , Yuanxing Ning , Philip S. Yu

The computational complexity of the graph isomorphism problem is considered to be a major open problem in theoretical computer science. It is known that testing isomorphism of chordal graphs is polynomial-time equivalent to the general…

Data Structures and Algorithms · Computer Science 2022-02-16 Vikraman Arvind , Roman Nedela , Ilia Ponomarenko , Peter Zeman

We introduce a new one-variable polynomial invariant of graphs, which we call the skew characteristic polynomial. For an oriented simple graph, this is just the characteristic polynomial of its anti-symmetric adjacency matrix. For…

Combinatorics · Mathematics 2024-02-14 R. Dogra , S. Lando

The comparison of graphs is a vitally important, yet difficult task which arises across a number of diverse research areas including biological and social networks. There have been a number of approaches to define graph distance however…

Social and Information Networks · Computer Science 2019-05-29 Andrew Mellor , Angelica Grusovin

Two simple undirected graphs are cospectral if their respective adjacency matrices have the same multiset of eigenvalues. Cospectrality yields an equivalence relation on the family of graphs which is provably weaker than isomorphism. In…

Data Structures and Algorithms · Computer Science 2023-06-21 Gaurav Rattan , Tim Seppelt

The invariance to permutations of the adjacency matrix, i.e., graph isomorphism, is an overarching requirement for Graph Neural Networks (GNNs). Conventionally, this prerequisite can be satisfied by the invariant operations over node…

Machine Learning · Computer Science 2022-05-31 Zhongyu Huang , Yingheng Wang , Chaozhuo Li , Huiguang He

We propose a new model, the Neighbor Mixture Model (NMM), for modeling node labels in a graph. This model aims to capture correlations between the labels of nodes in a local neighborhood. We carefully design the model so it could be an…

Machine Learning · Computer Science 2021-04-20 Linfeng Liu , Michael C. Hughes , Li-Ping Liu

In this work, we study semi-supervised multi-label node classification problem in attributed graphs. Classic solutions to multi-label node classification follow two steps, first learn node embedding and then build a node classifier on the…

Machine Learning · Computer Science 2024-03-14 Uchenna Akujuobi , Han Yufei , Qiannan Zhang , Xiangliang Zhang

We consider the problem of estimating the topology of multiple networks from nodal observations, where these networks are assumed to be drawn from the same (unknown) random graph model. We adopt a graphon as our random graph model, which is…

Machine Learning · Statistics 2022-02-14 Madeline Navarro , Santiago Segarra

Graphlets are defined as k-node connected induced subgraph patterns. For an undirected graph, 3-node graphlets include close triangle and open triangle. When k = 4, there are six types of graphlets, e.g., tailed-triangle and clique are two…

Machine Learning · Computer Science 2018-10-09 Xutong Liu , Yu-Zhen Janice Chen , John C. S. Lui , Konstantin Avrachenkov

An $H$-graph is an intersection graph of connected subgraphs of a suitable subdivision of a fixed graph $H$. Many important classes of graphs, including interval graphs, circular-arc graphs, and chordal graphs, can be expressed as…

Data Structures and Algorithms · Computer Science 2022-06-28 Deniz Ağaoğlu Çağırıcı , Peter Zeman

Graph-based clustering methods like spectral clustering and SpectralNet are very efficient in detecting clusters of non-convex shapes. Unlike the popular $k$-means, graph-based clustering methods do not assume that each cluster has a single…

Machine Learning · Computer Science 2023-02-28 Mashaan Alshammari , John Stavrakakis , Masahiro Takatsuka

The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-07 Siddharth Samsi , Vijay Gadepally , Michael Hurley , Michael Jones , Edward Kao , Sanjeev Mohindra , Paul Monticciolo , Albert Reuther , Steven Smith , William Song , Diane Staheli , Jeremy Kepner

The classification of high-dimensional data defined on graphs is particularly difficult when the graph geometry is unknown. We introduce a Haar scattering transform on graphs, which computes invariant signal descriptors. It is implemented…

Machine Learning · Computer Science 2014-11-04 Xu Chen , Xiuyuan Cheng , Stéphane Mallat

Subgraph counting is a fundamental task for analyzing structural patterns in graph-structured data, with important applications in domains such as computational biology and social network analysis, where recurring motifs reveal functional…

Machine Learning · Computer Science 2025-12-02 Shubhajit Roy , Shrutimoy Das , Binita Maity , Anant Kumar , Anirban Dasgupta

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

Social and Information Networks · Computer Science 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

We give a method of generating strongly polynomial sequences of graphs, i.e., sequences $(H_{\mathbf{k}})$ indexed by a multivariate parameter $\mathbf{k}=(k_1,\ldots, k_h)$ such that, for each fixed graph $G$, there is a multivariate…

Combinatorics · Mathematics 2013-08-20 Delia Garijo , Andrew Goodall , Jaroslav Nesetril