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Related papers: Ontology Pre-training for Poison Prediction

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Ontology revision aims to seamlessly incorporate a new ontology into an existing ontology and plays a crucial role in tasks such as ontology evolution, ontology maintenance, and ontology alignment. Similar to repair single ontologies,…

Artificial Intelligence · Computer Science 2023-12-27 Qiu Ji , Guilin Qi , Yuxin Ye , Jiaye Li , Site Li , Jianjie Ren , Songtao Lu

The ability to conduct logical reasoning is a fundamental aspect of intelligent human behavior, and thus an important problem along the way to human-level artificial intelligence. Traditionally, logic-based symbolic methods from the field…

Artificial Intelligence · Computer Science 2021-01-11 Patrick Hohenecker , Thomas Lukasiewicz

Graph knowledge models and ontologies are very powerful modeling and re asoning tools. We propose an effective approach to model network attacks and attack prediction which plays important roles in security management. The goals of this…

Artificial Intelligence · Computer Science 2013-04-04 Ahmad Salahi , Morteza Ansarinia

It has been reliably shown that the similarity of word embeddings obtained from popular neural models such as BERT approximates effectively a form of semantic similarity of the meaning of those words. It is therefore natural to wonder if…

Artificial Intelligence · Computer Science 2024-08-02 Mathieu d'Aquin , Emmanuel Nauer

When training data is scarce, the incorporation of additional prior knowledge can assist the learning process. While it is common to initialize neural networks with weights that have been pre-trained on other large data sets, pre-training…

Machine Learning · Computer Science 2022-05-24 Laura von Rueden , Sebastian Houben , Kostadin Cvejoski , Christian Bauckhage , Nico Piatkowski

Existing domain-specific Large Language Models (LLMs) are typically developed by fine-tuning general-purposed LLMs with large-scale domain-specific corpora. However, training on large-scale corpora often fails to effectively organize domain…

Computation and Language · Computer Science 2025-02-11 Zhiqiang Liu , Chengtao Gan , Junjie Wang , Yichi Zhang , Zhongpu Bo , Mengshu Sun , Huajun Chen , Wen Zhang

Ontologies are widely used for representing domain knowledge and meta data, playing an increasingly important role in Information Systems, the Semantic Web, Bioinformatics and many other domains. However, logical reasoning that ontologies…

Artificial Intelligence · Computer Science 2025-04-08 Jiaoyan Chen , Olga Mashkova , Fernando Zhapa-Camacho , Robert Hoehndorf , Yuan He , Ian Horrocks

Taking advantage of the widespread use of ontologies to organise and harmonize knowledge across several distinct domains, this paper proposes a novel approach to improve an embedding-Large Language Model (embedding-LLM) of interest by…

Computation and Language · Computer Science 2024-06-03 Francesco Ronzano , Jay Nanavati

Deep learning methods have advanced quickly in brain imaging analysis over the past few years, but they are usually restricted by the limited labeled data. Pre-trained model on unlabeled data has presented promising improvement in feature…

Neurons and Cognition · Quantitative Biology 2024-08-22 Jinlong Hu , Yangmin Huang , Nan Wang , Shoubin Dong

One of the main current challenges in Educational Data Mining and Learning Analytics is the portability or transferability of predictive models obtained for a particular course so that they can be applied to other different courses. To…

Artificial Intelligence · Computer Science 2024-10-11 Javier Lopez Zambrano , Juan A. Lara , Cristobal Romero

Deep learning models, while effective and versatile, are becoming increasingly complex, often including multiple overlapping networks of arbitrary depths, multiple objectives and non-intuitive training methodologies. This makes it…

Artificial Intelligence · Computer Science 2018-05-11 Iraklis A. Klampanos , Athanasios Davvetas , Antonis Koukourikos , Vangelis Karkaletsis

This work presents an ontology-integrated large language model (LLM) framework for chemical engineering that unites structured domain knowledge with generative reasoning. The proposed pipeline aligns model training and inference with the…

Machine Learning · Computer Science 2025-12-15 Crystal Su , Kuai Yu , Jingrui Zhang , Mingyuan Shao , Daniel Bauer

Ontologies provide formal representation of knowledge shared within Semantic Web applications. Ontology learning involves the construction of ontologies from a given corpus. In the past years, ontology learning has traversed through shallow…

Information Retrieval · Computer Science 2024-06-18 Rick Du , Huilong An , Keyu Wang , Weidong Liu

Query optimization has been studied using machine learning, reinforcement learning, and, more recently, graph-based convolutional networks. Ontology, as a structured, information-rich knowledge representation, can provide context,…

Databases · Computer Science 2025-11-11 Songhui Yue , Yang Shao , Sean Hayes

Prediction of toxicity levels of chemical compounds is an important issue in Quantitative Structure-Activity Relationship (QSAR) modeling. Although toxicity prediction has achieved significant progress in recent times through deep learning,…

Machine Learning · Computer Science 2019-07-22 Abdul Karim , Jaspreet Singh , Avinash Mishra , Abdollah Dehzangi , M. A. Hakim Newton , Abdul Sattar

The literature on machine teaching, machine education, and curriculum design for machines is in its infancy with sparse papers on the topic primarily focusing on data and model engineering factors to improve machine learning. In this paper,…

Artificial Intelligence · Computer Science 2020-02-11 Hussein A. Abbass , Sondoss Elsawah , Eleni Petraki , Robert Hunjet

OWL (Web Ontology Language) ontologies which are able to formally represent complex knowledge and support semantic reasoning have been widely adopted across various domains such as healthcare and bioinformatics. Recently, ontology…

Artificial Intelligence · Computer Science 2025-07-22 Hui Yang , Jiaoyan Chen , Yuan He , Yongsheng Gao , Ian Horrocks

Natural language processing (NLP) enables the understanding and generation of meaningful human language, typically using a pre-trained complex architecture on a large dataset to learn the language and next fine-tune its weights to implement…

Computation and Language · Computer Science 2025-09-04 Yarden Tzach , Ronit D. Gross , Ella Koresh , Shalom Rosner , Or Shpringer , Tal Halevi , Ido Kanter

In meta-learning approaches, it is difficult for a practitioner to make sense of what kind of representations the model employs. Without this ability, it can be difficult to both understand what the model knows as well as to make meaningful…

Machine Learning · Computer Science 2022-04-05 Pedro Sandoval-Segura , Wallace Lawson

Motivated by the desire to explore the process of combining inductive and deductive reasoning, we conducted a systematic literature review of articles that investigate the integration of machine learning and ontologies. The objective was to…

Artificial Intelligence · Computer Science 2024-02-20 Sarah Ghidalia , Ouassila Labbani Narsis , Aurélie Bertaux , Christophe Nicolle
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