Related papers: Dyck Words, Pattern Avoidance, and Automatic Seque…
A double occurrence word $w$ over a finite alphabet $\Sigma$ is a word in which each alphabet letter appears exactly twice. Such words arise naturally in the study of topology, graph theory, and combinatorics. Recently, double occurrence…
A pattern is encountered in a word if some infix of the word is the image of the pattern under some non-erasing morphism. A pattern $p$ is unavoidable if, over every finite alphabet, every sufficiently long word encounters $p$. A theorem by…
We consider a range of simply stated dynamic data structure problems on strings. An update changes one symbol in the input and a query asks us to compute some function of the pattern of length $m$ and a substring of a longer text. We give…
We consider the semiconjugate factorization and reduction of order for non-autonomous, nonlinear, higher order difference equations containing linear arguments. These equations have appeared in several mathematical models in biology and…
Here, we give upper and lower bounds on the count of positive integers $n\le x$ dividing the $n$th term of a nondegenerate linearly recurrent sequence with simple roots.
Motivation: Alignment-free (AF) distance/similarity functions are a key tool for sequence analysis. Experimental studies on real datasets abound and, to some extent, there are also studies regarding their control of false positive rate…
Upper bounds on the maximum number of codewords in a binary code of a given length and minimum Hamming distance are considered. New bounds are derived by a combination of linear programming and counting arguments. Some of these bounds…
We characterize the words that can be mapped to arbitrarily high powers by injective morphisms. For all other words, we prove a linear upper bound for the highest power that they can be mapped to, and this bound is optimal up to a constant…
A square is the concatenation of a nonempty word with itself. A word has period p if its letters at distance p match. The exponent of a nonempty word is the quotient of its length over its smallest period. In this article we give a proof of…
In the free group $F_k$, an element is said to be primitive if it belongs to a free generating set. In this paper, we describe what a generic primitive element looks like. We prove that up to conjugation, a random primitive word of length…
This paper proposes a novel framework connecting fermionic second quantization and Dyck languages. By defining translations of creation and annihilation operators using bracket alphabets, the study establishes nullity criteria for…
This thesis investigates three biologically inspired operations: prefix-suffix duplication, bounded prefix-suffix duplication, and prefix-suffix-square completion. Duplication, a common genetic mutation, involves repeating DNA sequences and…
Let $w$ be a finite word over the alphabet $\{0,1\}$. For any natural number $n$, let $s_w(n)$ denote the number of occurrence of $w$ in the binary expansion of $n$ as a scattered subsequence. We study the behavior of the partial sum…
We study how much injective morphisms can increase the repetitiveness of a given word. This question has a few possible variations depending on the meaning of ``repetitiveness''. We concentrate on fractional exponents of finite words and…
Repetition avoidance has been studied since Thue's work. In this paper, we considered another type of repetition, which is called pseudo-power. This concept is inspired by Watson-Crick complementarity in DNA sequence and is defined over an…
In [A. Frid, S. Puzynina, L.Q. Zamboni, \textit{On palindromic factorization of words}, Adv. in Appl. Math. 50 (2013), 737-748], it was conjectured that any infinite word whose palindromic lengths of factors are bounded is ultimately…
In this paper we study the privileged complexity function of the Thue-Morse word. We prove a recursive formula describing this function, and using the formula we show that the function is unbounded and that the values of the function have…
Two finite words are k-binomially equivalent if each subword (i.e., subsequence) of length at most k occurs the same number of times in both words. The k-binomial complexity of an infinite word is a function that maps the integer $n\geq 0$…
We prove that a random word of length $n$ over a $k$-ary fixed alphabet contains, on expectation, $\Theta(\sqrt{n})$ distinct palindromic factors. We study this number of factors, $E(n,k)$, in detail, showing that the limit…
The Nyldon factorization is a string factorization that is a non-decreasing product of Nyldon words. Nyldon words and Nyldon factorizations are recently defined combinatorial objects inspired by the well-known Lyndon words and Lyndon…