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The rise and fall of artificial neural networks is well documented in the scientific literature of both computer science and computational chemistry. Yet almost two decades later, we are now seeing a resurgence of interest in deep learning,…

Machine Learning · Statistics 2018-08-15 Garrett B. Goh , Nathan O. Hodas , Abhinav Vishnu

Function and dysfunctions of neural systems are tied to the temporal evolution of neural states. The current limitations in showing their causal role stem largely from the absence of tools capable of probing the brain's internal state in…

Neurons and Cognition · Quantitative Biology 2024-09-24 Ayesha Vermani , Matthew Dowling , Hyungju Jeon , Ian Jordan , Josue Nassar , Yves Bernaerts , Yuan Zhao , Steven Van Vaerenbergh , Il Memming Park

Neuroscience research has evolved to generate increasingly large and complex experimental data sets, and advanced data science tools are taking on central roles in neuroscience research. Neurodata Without Borders (NWB), a standard language…

Neurons and Cognition · Quantitative Biology 2024-01-23 Andrea Pierré , Tuan Pham , Jonah Pearl , Sandeep Robert Datta , Jason T. Ritt , Alexander Fleischmann

Deep learning (DL), a new-generation of artificial neural network research, has transformed industries, daily lives and various scientific disciplines in recent years. DL represents significant progress in the ability of neural networks to…

Machine Learning · Statistics 2018-09-05 Chaopeng Shen

In this chapter we first outline some of the popular computing environments used for analysing neural data, followed by a brief discussion of 'software carpentry', basic tools and skills from software engineering that can be of great use to…

Neurons and Cognition · Quantitative Biology 2012-07-26 Robin A. A. Ince

The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged…

Computers and Society · Computer Science 2018-09-27 Russell A. Poldrack , Krzysztof J. Gorgolewski , Gael Varoquaux

Code intelligence leverages machine learning techniques to extract knowledge from extensive code corpora, with the aim of developing intelligent tools to improve the quality and productivity of computer programming. Currently, there is…

Software Engineering · Computer Science 2024-01-02 Yao Wan , Yang He , Zhangqian Bi , Jianguo Zhang , Hongyu Zhang , Yulei Sui , Guandong Xu , Hai Jin , Philip S. Yu

The field of neuromorphic computing is in a period of active exploration. While many tools have been developed to simulate neuronal dynamics or convert deep networks to spiking models, general software libraries for learning rules remain…

Machine Learning · Computer Science 2021-08-17 Zixuan Zhao , Nathan Wycoff , Neil Getty , Rick Stevens , Fangfang Xia

Deep learning is transforming most areas of science and technology, including electron microscopy. This review paper offers a practical perspective aimed at developers with limited familiarity. For context, we review popular applications of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Jeffrey M. Ede

Deep learning has become a powerful tool in computational biology, revolutionising the analysis and interpretation of biological data over time. In our article review, we delve into various aspects of deep learning in computational biology.…

Deep learning continues to re-shape numerous fields, from natural language processing and imaging to data analytics and recommendation systems. This report studies two research papers that represent recent progress on deep learning from two…

Machine Learning · Computer Science 2024-07-22 Rui Xie

Deep learning achieves remarkable performance on pattern recognition, but can be vulnerable to defects of some important properties such as robustness and security. This tutorial is based on a stream of research conducted since the summer…

Software Engineering · Computer Science 2021-08-05 Nicolas Berthier , Youcheng Sun , Wei Huang , Yanghao Zhang , Wenjie Ruan , Xiaowei Huang

Neuroscience has focused on the detailed implementation of computation, studying neural codes, dynamics and circuits. In machine learning, however, artificial neural networks tend to eschew precisely designed codes, dynamics or circuits in…

Neurons and Cognition · Quantitative Biology 2020-02-04 Adam Marblestone , Greg Wayne , Konrad Kording

Machine learning is finding increasingly broad application in the physical sciences. This most often involves building a model relationship between a dependent, measurable output and an associated set of controllable, but complicated,…

Computational Physics · Physics 2018-08-29 Brian K. Spears

Deep learning advanced to one of the most important technologies in almost all medical fields. Especially in areas, related to medical imaging it plays a big role. However, in interventional radiotherapy (brachytherapy) deep learning is…

Medical Physics · Physics 2022-11-15 Tobias Fechter , Ilias Sachpazidis , Dimos Baltas

Embedded distributed inference of Neural Networks has emerged as a promising approach for deploying machine-learning models on resource-constrained devices in an efficient and scalable manner. The inference task is distributed across a…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-07 Federico Nicolás Peccia , Oliver Bringmann

Recently, Deep Neural Networks (DNNs) have emerged as the dominant model across various AI applications. In the era of IoT and mobile systems, the efficient deployment of DNNs on embedded platforms is vital to enable the development of…

Computer Vision and Pattern Recognition · Computer Science 2018-06-25 Stylianos I. Venieris , Alexandros Kouris , Christos-Savvas Bouganis

Deep learning has recently become one of the most popular sub-fields of machine learning owing to its distributed data representation with multiple levels of abstraction. A diverse range of deep learning algorithms are being employed to…

Computer Vision and Pattern Recognition · Computer Science 2018-04-12 Rajat Kumar Sinha , Ruchi Pandey , Rohan Pattnaik

The breakthrough in Deep Learning neural networks has transformed the use of AI and machine learning technologies for the analysis of very large experimental datasets. These datasets are typically generated by large-scale experimental…

Machine Learning · Computer Science 2021-10-26 Jeyan Thiyagalingam , Mallikarjun Shankar , Geoffrey Fox , Tony Hey

Machine learning and deep learning are two subsets of artificial intelligence that involve teaching computers to learn and make decisions from any sort of data. Most recent developments in artificial intelligence are coming from deep…

Computer Vision and Pattern Recognition · Computer Science 2023-10-23 Elif Keles , Ulas Bagci