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Small-angle scattering (SAS) is a key experimental technique for analyzing nano-scale structures in various materials.In SAS data analysis, selecting an appropriate mathematical model for the scattering intensity is critical, as it…

Data Analysis, Statistics and Probability · Physics 2024-01-22 Yui Hayashi , Shun Katakami , Shigeo Kuwamoto , Kenji Nagata , Masaichiro Mizumaki , Masato Okada

For obtaining reliable nanostructural details of large amounts of sample --- and if it is applicable --- Small-Angle Scattering (SAS) is a prime technique to use. It promises to obtain bulk-scale, statistically sound information on the…

Materials Science · Physics 2013-09-02 Brian Richard Pauw

A reliable and user-friendly characterisation of nano-objects in a target material is presented here in the form of a software data analysis package for interpreting small-angle X-ray scattering (SAXS) patterns. When provided with data on…

Data Analysis, Statistics and Probability · Physics 2014-12-08 Ingo Breßler , Brian R. Pauw , Andreas Thünemann

Characterization of structural diversity within soft materials is key for engineering new materials for various applications. Small-angle scattering (SAS) is a widely used characterization technique that provides structural information in…

Soft Condensed Matter · Physics 2024-03-29 Sri Vishnuvardhan Reddy Akepati , Nitant Gupta , Arthi Jayaraman

Small-angle scattering (SAS) techniques, which utilize neutrons and X-rays, are employed in various scientific fields, including materials science, biochemistry, and polymer physics. During the analysis of SAS data, model parameters that…

Small-Angle Scattering (SAS) investigates structures in samples that generally range from approximately 0.5 nm to a few 100 nm. This can both be done for isotropic samples such as blends and liquids, as well as anisotropic samples such as…

Instrumentation and Detectors · Physics 2023-09-22 Sebastian Jaksch

Small-angle X-ray or neutron scattering (SAXS/SANS/SAS) is widely used to obtain structural information on biomolecules or soft-matter complexes in solution. Deriving a molecular interpretation of the scattering signals requires methods for…

Biological Physics · Physics 2022-08-16 Leonie Chatzimagas , Jochen S. Hub

Small-angle X-ray and neutron scattering experiments are used in many fields of the life sciences and condensed matter research to obtain answers to questions about the shape and size of nano-sized structures, typically in the range of 1 to…

Data Analysis, Statistics and Probability · Physics 2015-06-10 Ingo Breßler , Joachim Kohlbrecher , Andreas F. Thünemann

In this paper, we propose a method for estimating model parameters using Small-Angle Scattering (SAS) data based on the Bayesian inference. Conventional SAS data analyses involve processes of manual parameter adjustment by analysts or…

Analysis of small angle scattering (SAS) data requires intensive modelling to infer and characterize the structures present in a sample. This iterative improvement of models is a time consuming process. Here we present the Scattering…

Computational Physics · Physics 2023-11-30 Tobias William Jensen Jarrett , Carsten Svaneborg

Small Angle Scattering (SAS) of X-rays or neutrons is an experimental technique that provides valuable structural information for biological macromolecules under physiological conditions and with no limitation on the molecular size. In…

Biomolecules · Quantitative Biology 2013-06-11 Konstantin Berlin , Nail A. Gumerov , Ramani Duraiswami , David Fushman

We extends pair distribution function (PDF) analysis into the small-angle scattering (SAS) regime and describe the data collection protocol for optimum data quality. We also present the PDFgetS3 software package that can be readily used to…

Assessing the similarity of matrices is valuable for analyzing the extent to which data sets exhibit common features in tasks such as data clustering, dimensionality reduction, pattern recognition, group comparison, and graph analysis.…

Neurons and Cognition · Quantitative Biology 2025-02-26 Jasper Albers , Anno C. Kurth , Robin Gutzen , Aitor Morales-Gregorio , Michael Denker , Sonja Grün , Sacha J. van Albada , Markus Diesmann

In this paper, we extend a recently developed machine-learning (ML) based CREASE-2D method to analyze the entire two-dimensional (2D) scattering pattern obtained from small angle X-ray scattering measurements of supramolecular dipeptide…

Soft Condensed Matter · Physics 2025-04-08 Nitant Gupta , Sri V. V. R. Akepati , Simona Bianco , Jay Shah , Dave J. Adams , Arthi Jayaraman

We propose a versatile software package in the form of a Python extension, named CDEF (Computing Debye's scattering formula for Extraordinary Formfactors), to approximately calculate scattering profiles of arbitrarily shaped nanoparticles…

Mesoscale and Nanoscale Physics · Physics 2022-05-13 Jérôme Deumer , Brian R. Pauw , Sylvie Marguet , Dieter Skroblin , Olivier Taché , Michael Krumrey , Christian Gollwitzer

Data visualizations summarize high-dimensional distributions in two or three dimensions. Dimensionality reduction entails a loss of information, and what is preserved differs between methods. Existing methods preserve the local or the…

Computation · Statistics 2021-07-05 Andrew D Zaharia , Anish S Potnis , Alexander Walther , Nikolaus Kriegeskorte

Statistical shape modeling is the computational process of discovering significant shape parameters from segmented anatomies captured by medical images (such as MRI and CT scans), which can fully describe subject-specific anatomy in the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Krithika Iyer , Shireen Elhabian

Open-source 3D data processing libraries originally developed for computer vision and pattern recognition are used to align and compare molecular shapes and sub-shapes. Here, a shape is represented by a set of points distributed on the van…

Biomolecules · Quantitative Biology 2019-08-30 Dominique Douguet , Frédéric Payan

3D scatterplots are a well-established plotting technique that can be used to represent data with three or more dimensions. On paper and computer monitors they are essentially two-dimensional projections of the three-dimensional Cartesian…

Human-Computer Interaction · Computer Science 2026-01-05 Philippos Papaphilippou , Lucy Hederman

Small angle X-ray scattering (SAXS) is extensively used in materials science as a way of examining nanostructures. The analysis of experimental SAXS data involves mapping a rather simple data format to a vast amount of structural models.…

Machine Learning · Computer Science 2021-11-17 Piotr Tomaszewski , Shun Yu , Markus Borg , Jerk Rönnols
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