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The analysis of biological networks has benefited from the richness of Boolean networks (BNs) and the associated theory. These results have been further fortified in recent years by the emergence of Most Permissive (MP) semantics, combining…

Discrete Mathematics · Computer Science 2025-05-26 Stefan Haar , Juri Kolčák

The concept of nestedness, in particular for ecological and economical networks, has been introduced as a structural characteristic of real interacting systems. We suggest that the nestedness is in fact another way to express a mesoscale…

Physics and Society · Physics 2016-02-22 Sang Hoon Lee

Binary Neural Networks (BNNs) offer a low-complexity and energy-efficient alternative to traditional full-precision neural networks by constraining their weights and activations to binary values. However, their discrete, highly non-linear…

Machine Learning · Computer Science 2026-02-16 Mohamed Tarraf , Alex Chan , Alex Yakovlev , Rishad Shafik

The execution of different cases of a process is often restricted by inter-case dependencies through e.g., queueing or shared resources. Various high-level Petri net formalisms have been proposed that are able to model and analyze…

Formal Languages and Automata Theory · Computer Science 2023-04-12 Dominique Sommers , Natalia Sidorova , Boudewijn F. van Dongen

For optimal placement and orchestration of network services, it is crucial that their structure and semantics are specified clearly and comprehensively and are available to an orchestrator. Existing specification approaches are either…

Networking and Internet Architecture · Computer Science 2018-08-15 Stefan Schneider , Arnab Sharma , Holger Karl , Heike Wehrheim

Compositionality is at the heart of computer science and several other areas of applied category theory such as computational linguistics, categorical quantum mechanics, interpretable AI, dynamical systems, compositional game theory, and…

Category Theory · Mathematics 2023-12-15 Caterina Puca , Amar Hadzihasanovic , Fabrizio Genovese , Bob Coecke

A process discovery algorithm aims to construct a model from data generated by historical system executions such that the model describes the system well. Consequently, one desired property of a process discovery algorithm is…

Formal Languages and Automata Theory · Computer Science 2023-03-20 Daniël Barenholz , Marco Montali , Artem Polyvyanyy , Hajo A. Reijers , Andrey Rivkin , Jan Martijn E. M. van der Werf

In an earlier paper we introduced a notion of Markov automaton, together with parallel operations which permit the compositional description of Markov processes. We illustrated by showing how to describe a system of n dining philosophers,…

Category Theory · Mathematics 2010-05-07 L. de Francesco Albasini , N. Sabadini , R. F. C. Walters

This paper addresses the problem of infinite-step opacity and K-step opacity of discrete event systems modeled with Petri nets. A Petri net system is said to be infinite-step/K-step opaque if all its secret states remains opaque to an…

Systems and Control · Electrical Eng. & Systems 2019-09-12 Hao Lan , Yin Tong , Jin Guo , Carla Seatzu

Here we focus on the challenge of verifying the correctness of molecular implementations of abstract chemical reaction networks, where operation in a well-mixed "soup" of molecules is stochastic, asynchronous, concurrent, and often involves…

Computational Engineering, Finance, and Science · Computer Science 2019-10-01 Seung Woo Shin , Chris Thachuk , Erik Winfree

This thesis details a project to define a fully compositional theory of synchronous sequential circuits built from primitive components, motivated by applying techniques successfully used in programming languages to hardware. The first part…

Logic in Computer Science · Computer Science 2025-02-13 George Kaye

Web services substitution is one of the most challenging tasks for automating the composition process of multiple Web services. It aims to improve performances and to deal efficiently with Web services failures. Many existing solutions have…

Software Engineering · Computer Science 2013-05-02 Chantal Cherifi

Interaction languages such as MSC are often associated with formal semantics by means of translations into distinct behavioral formalisms such as automatas or Petri nets. In contrast to translational approaches we propose an operational…

Software Engineering · Computer Science 2020-05-08 Erwan Mahe , Christophe Gaston , Pascale Le Gall

We realize norms of most composition operators acting on the Hardy space with linear fractional symbol as roots of hypergeometric functions. This realization leads to simple necessary and sufficient conditions on the symbol to exhibit…

Complex Variables · Mathematics 2007-05-23 Estelle L. Basor , Dylan Q. Retsek

Identifying semantically equivalent sentences is important for many cross-lingual and mono-lingual NLP tasks. Current approaches to semantic equivalence take a loose, sentence-level approach to "equivalence," despite previous evidence that…

Computation and Language · Computer Science 2022-10-07 Shira Wein , Zhuxin Wang , Nathan Schneider

Finite 1-safe Petri nets, also called \emph{net systems}, are natural models of asynchronous concurrency. The event structure of a net system describes all its possible executions and their concurrent nature: two events may be causally…

Logic in Computer Science · Computer Science 2022-04-13 Hugo Gimbert

A process model is called sound if it always terminates properly and each model activity can occur in a process instance. Conducting soundness verification right after process design allows one to detect and eliminate design errors in a…

Logic in Computer Science · Computer Science 2025-02-18 Nikolai M. Suvorov , Irina A. Lomazova , Andrey Rivkin

We give a definition of $\mathsf{Q}$-net, a generalization of Petri nets based on a Lawvere theory $\mathsf{Q}$, for which many existing variants of Petri nets are a special case. This definition is functorial with respect to change in…

Category Theory · Mathematics 2020-11-25 Jade Master

The last decade has witnessed an increasing transformation in the design, engineering, and mining of processes, moving from a pure control-flow perspective to more integrated models where also data and decisions are explicitly considered.…

Logic in Computer Science · Computer Science 2018-04-09 Massimiliano de Leoni , Paolo Felli , Marco Montali

Collaboration mining develops discovery, conformance checking, and enhancement techniques for collaboration processes. The collaboration process model is key to represent the discovery result. As for process mining in general, Petri Net…

Formal Languages and Automata Theory · Computer Science 2023-09-13 Janik-Vasily Benzin , Stefanie Rinderle-Ma