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Inferring microbial community structure based on temporal metagenomics data is an important goal in microbiome studies. The deterministic generalized Lotka-Volterra differential (GLV) equations have been used to model the dynamics of…

Methodology · Statistics 2020-09-24 Libai Xu , Ximing Xu , Dehan Kong , Hong Gu , Toby Kenney

The random Lotka-Volterra model is widely used to describe the dynamical and thermodynamic features of ecological communities. In this work, we consider random symmetric interactions between species and analyze the strongly competitive…

Disordered Systems and Neural Networks · Physics 2022-02-22 Giulia Garcia Lorenzana , Ada Altieri

We study the general properties of stochastic two-species models for predator-prey competition and coexistence with Lotka-Volterra type interactions defined on a $d$-dimensional lattice. Introducing spatial degrees of freedom and allowing…

Populations and Evolution · Quantitative Biology 2007-06-07 Mauro Mobilia , Ivan T. Georgiev , Uwe C. Tauber

The generalized Lotka-Volterra (gLV) equations model the microbiome as a collection of interacting ecological species. Here we use a particular experimentally-derived gLV model of C. difficile infection (CDI) as a case study to generate…

Populations and Evolution · Quantitative Biology 2020-07-24 Eric W. Jones , Parker Shankin-Clarke , Jean M. Carlson

We investigate spatially inhomogeneous versions of the stochastic Lotka-Volterra model for predator-prey competition and coexistence by means of Monte Carlo simulations on a two-dimensional lattice with periodic boundary conditions. To…

Statistical Mechanics · Physics 2017-10-13 Bassel Heiba , Sheng Chen , Uwe C. Täuber

Explaining the emergence of self-organized biodiversity and species abundance distribution patterns remians a fundamental challenge in ecology. While classical frameworks, such as neutral theory and models based on pairwise species…

Populations and Evolution · Quantitative Biology 2025-10-29 Ju Kang , Yiyuan Niu , Yuanzhi Li , Chengjin Chu

We investigate the outcome of generalised Lotka-Volterra dynamics of ecological communities with random interaction coefficients and non-linear feedback. We show in simulations that the saturation of non-linear feedback stabilises the…

Populations and Evolution · Quantitative Biology 2020-03-27 Laura Sidhom , Tobias Galla

Ecological communities are composed of species interactions that respond to environmental fluctuations. Despite increasing evidence of temporal variation in these interactions, most theoretical frameworks remain rooted in static…

We study the equilibrium phases of a generalized Lotka-Volterra model characterized by a species interaction matrix which is random, sparse and symmetric. Dynamical fluctuations are modeled by a demographic noise with amplitude proportional…

Statistical Mechanics · Physics 2026-02-11 Tommaso Tonolo , Maria Chiara Angelini , Sandro Azaele , Amos Maritan , Giacomo Gradenigo

Lotka-Volterra (LV) equations play a key role in the mathematical modeling of various ecological, biological and chemical systems. When the number of species (or, depending on the viewpoint, chemical components) becomes large, basic but…

Probability · Mathematics 2022-05-03 Maxime Clenet , François Massol , Jamal Najim

A non-Markovian stochastic predator-prey model is introduced in which the prey are immobile plants and predators are diffusing herbivors. The model is studied by both mean-field approximation (MFA)and computer simulations. The MFA results a…

Disordered Systems and Neural Networks · Physics 2009-10-31 Rouzbeh Gerami , Mohammad R. Ejtehadi

Omnivory is defined as feeding on more than one trophic level. An example of this is the so-called intraguild predation (IG) which includes a predator and its prey that share a common resource. IG predation models are known to exhibit…

Dynamical Systems · Mathematics 2015-11-10 Juancho A. Collera

This paper deals with the existence, multiplicity, minimal complexity and global structure of the subharmonic solutions to a class of planar Hamiltonian systems with periodic coefficients, being the classical predator-prey model of V.…

Populations and Evolution · Quantitative Biology 2022-12-23 Julián López-Gómez , Eduardo Muñoz-Hernández , Fabio Zanolin

We use generating functionals to derive a dynamic mean-field description for generalised Lotka-Volterra systems with higher-order quenched random interactions. We use the resulting single effective species process to determine the stability…

Populations and Evolution · Quantitative Biology 2024-09-18 Laura Sidhom , Tobias Galla

In this work, we examine a kinetic framework for modeling the time evolution of size distribution densities of two populations governed by predator-prey interactions. The model builds upon the classical Boltzmann-type equations, where the…

Analysis of PDEs · Mathematics 2025-11-27 Andrea Bondesan , Marco Menale , Giuseppe Toscani , Mattia Zanella

In this work we analyse the topological and dynamical properties of a simple model of complex food webs, namely the niche model. In order to underline competition among species, we introduce "prey" and "predators" weighted overlap graphs…

Populations and Evolution · Quantitative Biology 2012-09-13 Gian Marco Palamara , Vinko Zlatic , Antonio Scala , Guido Caldarelli

The difficulty with control of population dynamics, besides the states being positive and the control having to also be positive, is the extreme difference in the dynamics near extinction and at overpopulated states. As hard as global…

Systems and Control · Electrical Eng. & Systems 2026-02-26 Miroslav Krstic

The noise-induced pattern formation in a population dynamical model of three interacting species in the coexistence regime is investigated. A coupled map lattice of Lotka-Volterra equations in the presence of multiplicative noise is used to…

Statistical Mechanics · Physics 2007-05-23 A. Fiasconaro , D. Valenti , B. Spagnolo

We prove the existence of infinitely many periodic solutions and complicated dynamics, due to the presence of a topological horseshoe, for the classical Volterra predator--prey model with a periodic harvesting. The proof relies on some…

Dynamical Systems · Mathematics 2008-05-29 Marina Pireddu , Fabio Zanolin

The classical Lotka-Volterra predator-prey system is often used in species competition modeling. An exact, closed-form solution is derived when the natural growth rate of the prey species and decay rate of the predators are equal in…

Dynamical Systems · Mathematics 2023-03-17 Jean-Luc Boulnois