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In the last decade, there has been a growing body of literature addressing the utilization of complex network methods for the characterization of dynamical systems based on time series. While both nonlinear time series analysis and complex…

Data Analysis, Statistics and Probability · Physics 2025-02-03 Yong Zou , Reik V. Donner , Norbert Marwan , Jonathan F. Donges , Jürgen Kurths

High-accuracy prediction of the physical properties of amorphous materials is challenging in condensed-matter physics. A promising method to achieve this is machine-learning potentials, which is an alternative to computationally demanding…

Machine Learning · Computer Science 2023-05-23 Emi Minamitani , Ippei Obayashi , Koji Shimizu , Satoshi Watanabe

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Reconstructing the attractors of complex nonlinear dynamical systems from available measurements is key to analyse and predict their time evolution. Existing attractor reconstruction methods typically rely on topological embedding and may…

Neurons and Cognition · Quantitative Biology 2025-07-28 Uros Sutulovic , Daniele Proverbio , Rami Katz , Giulia Giordano

The reconstruction of time-dependent Robin coefficients is a challenging inverse heat transfer problem due to its inherent ill-posedness. This paper introduces a hierarchical Bayesian approach integrated with a persistent homology (PH)…

Computation · Statistics 2026-04-27 Xiaomei Yang , Jiaying Jia , Zhiliang Deng

Topological Data Analysis (TDA) is a novel statistical technique, particularly powerful for the analysis of large and high dimensional data sets. Much of TDA is based on the tool of persistent homology, represented visually via persistence…

Applications · Statistics 2017-11-07 Sarit Agami , Robert J. Adler

In this paper, we propose Quasi Zigzag Persistent Homology (QZPH) as a framework for analyzing time-varying data by integrating multiparameter persistence and zigzag persistence. To this end, we introduce a stable topological invariant that…

Machine Learning · Computer Science 2026-01-21 Tamal K. Dey , Shreyas N. Samaga

Topological data analysis is becoming increasingly relevant to support the analysis of unstructured data sets. A common assumption in data analysis is that the data set is a sample---not necessarily a uniform one---of some high-dimensional…

Algebraic Topology · Mathematics 2021-01-20 Bastian Rieck , Markus Banagl , Filip Sadlo , Heike Leitte

The horizontal visibility algorithm has been recently introduced as a mapping between time series and networks. The challenge lies in characterizing the structure of time series (and the processes that generated those series) using the…

Data Analysis, Statistics and Probability · Physics 2016-12-21 Angel M. Núñez , Lucas Lacasa , Eusebio Valero , Jose Patricio Gómez , Bartolo Luque

Topological data analysis (TDA) studies the shape patterns of data. Persistent homology is a widely used method in TDA that summarizes homological features of data at multiple scales and stores them in persistence diagrams (PDs). In this…

Machine Learning · Statistics 2022-09-16 Theodore Papamarkou , Farzana Nasrin , Austin Lawson , Na Gong , Orlando Rios , Vasileios Maroulas

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

Persistence diagrams offer a way to summarize topological and geometric properties latent in datasets. While several methods have been developed that utilize persistence diagrams in statistical inference, a full Bayesian treatment remains…

Methodology · Statistics 2019-08-08 Vasileios Maroulas , Farzana Nasrin , Christopher Oballe

We introduce PH-STAT, a comprehensive MATLAB toolbox designed for performing a wide range of statistical inferences and machine learning tasks on persistent homology, primarily for network and graph data, with an emphasis on brain network…

Algebraic Topology · Mathematics 2025-02-20 Moo K. Chung

We address the problem of learning the dynamics of an unknown non-parametric system linking a target and a feature time series. The feature time series is measured on a sparse and irregular grid, while we have access to only a few points of…

Machine Learning · Statistics 2023-06-01 Linus Bleistein , Adeline Fermanian , Anne-Sophie Jannot , Agathe Guilloux

The curve time series framework provides a convenient vehicle to accommodate some nonstationary features into a stationary setup. We propose a new method to identify the dimensionality of curve time series based on the dynamical dependence…

Statistics Theory · Mathematics 2012-11-13 Neil Bathia , Qiwei Yao , Flavio Ziegelmann

Analyzing singular patterns in vector fields is a fundamental problem in theoretical and practical domains due to the ability of such patterns to detect the intrinsic characteristics of vector fields. In this study, we propose an approach…

Computational Geometry · Computer Science 2025-07-17 Yu Chen , Hongwei Lin

Detecting small targets at range is difficult because there is not enough spatial information present in an image sub-region containing the target to use correlation-based methods to differentiate it from dynamic confusers present in the…

Computer Vision and Pattern Recognition · Computer Science 2021-02-15 Tegan Emerson , Sarah Tymochko , George Stantchev , Jason A. Edelberg , Michael Wilson , Colin C. Olson

Topological data analysis (TDA) is an active field of mathematics for quantifying shape in complex data. Standard methods in TDA such as persistent homology (PH) are typically focused on the analysis of data consisting of a single entity…

Time series classification is crucial for numerous scientific and engineering applications. In this article, we present a numerically efficient, practically competitive, and theoretically rigorous classification method for distinguishing…

Methodology · Statistics 2025-07-11 Chen Qian , Xiucai Ding , Lexin Li

Cyber-physical systems of today are generating large volumes of time-series data. As manual inspection of such data is not tractable, the need for learning methods to help discover logical structure in the data has increased. We propose a…