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Related papers: Graph Contrastive Learning for Multi-omics Data

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Contrastive deep graph clustering (CDGC) leverages the power of contrastive learning to group nodes into different clusters. The quality of contrastive samples is crucial for achieving better performance, making augmentation techniques a…

Machine Learning · Computer Science 2024-08-07 Xihong Yang , Erxue Min , Ke Liang , Yue Liu , Siwei Wang , Sihang Zhou , Huijun Wu , Xinwang Liu , En Zhu

This study introduces the Multi-Scale Weight-Based Pairwise Coarsening and Contrastive Learning (MPCCL) model, a novel approach for attributed graph clustering that effectively bridges critical gaps in existing methods, including long-range…

Machine Learning · Computer Science 2025-07-29 Binxiong Li , Yuefei Wang , Binyu Zhao , Heyang Gao , Benhan Yang , Quanzhou Luo , Xue Li , Xu Xiang , Yujie Liu , Huijie Tang

Molecular Machine Learning (ML) bears promise for efficient molecule property prediction and drug discovery. However, labeled molecule data can be expensive and time-consuming to acquire. Due to the limited labeled data, it is a great…

Machine Learning · Computer Science 2022-04-01 Yuyang Wang , Jianren Wang , Zhonglin Cao , Amir Barati Farimani

Multilayer graph has garnered plenty of research attention in many areas due to their high utility in modeling interdependent systems. However, clustering of multilayer graph, which aims at dividing the graph nodes into categories or…

Social and Information Networks · Computer Science 2021-12-30 Liang Liu , Zhao Kang , Ling Tian , Wenbo Xu , Xixu He

Integration of heterogeneous and high-dimensional multi-omics data is becoming increasingly important in understanding genetic data. Each omics technique only provides a limited view of the underlying biological process and integrating…

Machine Learning · Computer Science 2023-04-13 Chen Zhao , Anqi Liu , Xiao Zhang , Xuewei Cao , Zhengming Ding , Qiuying Sha , Hui Shen , Hong-Wen Deng , Weihua Zhou

Knowledge graph embedding (KGE) aims at learning powerful representations to benefit various artificial intelligence applications. Meanwhile, contrastive learning has been widely leveraged in graph learning as an effective mechanism to…

Artificial Intelligence · Computer Science 2023-06-14 Ke Liang , Yue Liu , Sihang Zhou , Wenxuan Tu , Yi Wen , Xihong Yang , Xiangjun Dong , Xinwang Liu

Graph contrastive learning (GCL) has emerged as a pivotal technique in the domain of graph representation learning. A crucial aspect of effective GCL is the caliber of generated positive and negative samples, which is intrinsically dictated…

Machine Learning · Computer Science 2024-02-19 Xinjian Zhao , Liang Zhang , Yang Liu , Ruocheng Guo , Xiangyu Zhao

As the basic element of graph-structured data, node has been recognized as the main object of study in graph representation learning. A single node intuitively has multiple node-centered subgraphs from the whole graph (e.g., one person in a…

Artificial Intelligence · Computer Science 2023-09-01 Dong Li , Wenjun Wang , Minglai Shao , Chen Zhao

In recommender systems, knowledge graph (KG) can offer critical information that is lacking in the original user-item interaction graph (IG). Recent process has explored this direction and shows that contrastive learning is a promising way…

Information Retrieval · Computer Science 2023-09-26 Haibo Ye , Xinjie Li , Yuan Yao , Hanghang Tong

Graph-level representations are critical in various real-world applications, such as predicting the properties of molecules. But in practice, precise graph annotations are generally very expensive and time-consuming. To address this issue,…

Machine Learning · Computer Science 2022-07-26 Shuai Lin , Pan Zhou , Zi-Yuan Hu , Shuojia Wang , Ruihui Zhao , Yefeng Zheng , Liang Lin , Eric Xing , Xiaodan Liang

Personalized recommender systems play a crucial role in capturing users' evolving preferences over time to provide accurate and effective recommendations on various online platforms. However, many recommendation models rely on a single type…

Information Retrieval · Computer Science 2023-10-23 Wei Wei , Lianghao Xia , Chao Huang

Recent studies show that graph convolutional network (GCN) often performs worse for low-degree nodes, exhibiting the so-called structural unfairness for graphs with long-tailed degree distributions prevalent in the real world. Graph…

Machine Learning · Computer Science 2022-10-07 Ruijia Wang , Xiao Wang , Chuan Shi , Le Song

Recommender systems (RecSys) are essential for online platforms, providing personalized suggestions to users within a vast sea of information. Self-supervised graph learning seeks to harness high-order collaborative filtering signals…

Information Retrieval · Computer Science 2025-07-18 Weizhi Zhang , Liangwei Yang , Zihe Song , Henrry Peng Zou , Ke Xu , Yuanjie Zhu , Philip S. Yu

With the explosive growth of information technology, multi-view graph data have become increasingly prevalent and valuable. Most existing multi-view clustering techniques either focus on the scenario of multiple graphs or multi-view…

Machine Learning · Computer Science 2021-10-25 Erlin Pan , Zhao Kang

Learning node-level representations of heterophilic graphs is crucial for various applications, including fraudster detection and protein function prediction. In such graphs, nodes share structural similarity identified by the equivalence…

Machine Learning · Computer Science 2023-08-22 Asif Khan , Amos Storkey

Graph classification is a widely studied problem and has broad applications. In many real-world problems, the number of labeled graphs available for training classification models is limited, which renders these models prone to overfitting.…

Machine Learning · Computer Science 2020-09-15 Jiaqi Zeng , Pengtao Xie

Heterogeneous graph neural networks (HGNNs) have demonstrated their superiority in exploiting auxiliary information for recommendation tasks. However, graphs constructed using meta-paths in HGNNs are usually too dense and contain a large…

Information Retrieval · Computer Science 2025-06-02 Lei Sang , Yu Wang , Yiwen Zhang

Previous Online Knowledge Distillation (OKD) often carries out mutually exchanging probability distributions, but neglects the useful representational knowledge. We therefore propose Multi-view Contrastive Learning (MCL) for OKD to…

Computer Vision and Pattern Recognition · Computer Science 2021-04-13 Chuanguang Yang , Zhulin An , Yongjun Xu

Unsupervised multiplex graph learning (UMGL) has been shown to achieve significant effectiveness for different downstream tasks by exploring both complementary information and consistent information among multiple graphs. However, previous…

Machine Learning · Computer Science 2023-08-04 Liang Peng , Xin Wang , Xiaofeng Zhu

Graph contrastive learning (GCL) has emerged as a promising approach to enhance graph neural networks' (GNNs) ability to learn rich representations from unlabeled graph-structured data. However, current GCL models face challenges with…

Machine Learning · Computer Science 2025-03-11 Yujia Wu , Junyi Mo , Elynn Chen , Yuzhou Chen
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