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Understanding anomalous transport and reaction kinetics due to microscopic physical and chemical disorder is a long-standing goal in many fields including geophysics, biology, and engineering. We consider reaction-diffusion characterized by…

Soft Condensed Matter · Physics 2017-10-11 Gerald J. Lapeyre , Marco Dentz

This paper provides a theoretical framework of deriving the forward and backward Feynman-Kac equations for the distribution of functionals of the path of a particle undergoing both diffusion and chemical reaction. Very general forms of the…

Statistical Mechanics · Physics 2018-03-20 Ru Hou , Weihua Deng

Achieving dynamic manipulation and control of single molecules at high spatio-temporal resolution is pivotal for advancing atomic-scale computing and nanorobotics. However, this endeavour is critically challenged by complex nature of atomic…

Atomic and Molecular Clusters · Physics 2024-06-18 Divyam Neer Verma , KV Chinmaya , Jan Heck , G Mohan Rao , Sonia Contera , Moumita Ghosh , Siddharth Ghosh

The bulk-surface wave pinning model is a reaction-diffusion system for studying cell polarisation. It is constituted by a surface reaction-diffusion equation, coupled to a bulk diffusion equation with a non-linear boundary condition. Cell…

Biological Physics · Physics 2022-11-01 Davide Cusseddu , Anotida Madzvamuse

Hot monomers are particles having a transient mobility (a ballistic flight) prior to being definitely absorbed on a surface. After arriving at a surface, the excess energy coming from the kinetic energy in the gas phase is dissipated…

Statistical Mechanics · Physics 2009-10-31 Daniel H. Linares , Ezequiel V. Albano , Roberto A. Monetti

We survey recent results on reaction-diffusion equations with discontinuous hysteretic nonlinearities. We connect these equations with free boundary problems and introduce a related notion of spatial transversality for initial data and…

Analysis of PDEs · Mathematics 2015-08-11 Mark Curran , Pavel Gurevich , Sergey Tikhomirov

We study the planar front solution for a class of reaction diffusion equations in multidimensional space in the case when the essential spectrum of the linearization in the direction of the front touches the imaginary axis. At the linear…

Analysis of PDEs · Mathematics 2017-12-11 Anna Ghazaryan , Yuri Latushkin , Xinyao Yang

A simple model which can explain the observed vertical distribution and size spectrum of atmospheric aerosol has been proposed. The model is based on a new physical hypothesis for the vertical mass exchange between the troposphere and the…

General Physics · Physics 2007-05-23 A. Mary Selvam , A. S. Ramachandra Murty , Bh. V. Ramanamurty

In a recent article the most general non-uniform reaction-diffusion models on a one-dimensional lattice with boundaries were considered, for which the time evolution equations of correlation functions are closed and the stationary profile…

Statistical Mechanics · Physics 2011-08-09 Amir Aghamohammadi , Mohammad Khorrami

Propagation of solitary waves in the presence of autocatalysis, diffusion, and symmetry breaking (differential) advection, is being studied. The focus is on drifting (propagating with advection) pulses that form via a convective instability…

Pattern Formation and Solitons · Physics 2010-02-08 Arik Yochelis , Moshe Sheintuch

We consider a single-species diffusion-limited annihilation reaction with reactants confined to a two-dimensional surface with one arbitrarily large dimension and the other comparable in size to interparticle distances. This situation could…

Biomolecules · Quantitative Biology 2015-03-20 Aleksandr Kivenson , Michael F. Hagan

We consider general multi-species models of reaction diffusion processes and obtain a set of constraints on the rates which give rise to closed systems of equations for correlation functions. Our results are valid in any dimension and on…

Statistical Mechanics · Physics 2009-11-07 Vahid Karimipour

Inspired by the recent developments in modeling and analysis of reaction networks, we provide a geometric formulation of the reversible reaction networks under the influence of diffusion. Using the graph knowledge of the underlying reaction…

Systems and Control · Computer Science 2012-12-21 Marko Seslija , Arjan van der Schaft , Jacquelien M. A. Scherpen

Diffusion is often accompanied by a reaction or sorption which can induce temperature inhomogeneities. Monte Carlo simulations of Lennard-Jones atoms in zeolite NaCaA are reported with a hot zone presumed to be created by a reaction. Our…

Statistical Mechanics · Physics 2019-05-15 A. V. Anil Kumar , S. Yashonath , G. Ananthakrishna

The migration of active particles in slowly moving, crowded, and heterogeneous media is fundamental to various biological processes and technological applications, such as cargo transport. In this study, we numerically investigate the…

Soft Condensed Matter · Physics 2024-12-04 Meng-Yuan Li , Ning Zheng , Yan-Wei Li

Physics-guided sampling with diffusion model priors has shown promise for solving partial differential equation (PDE) governed problems, but applications to chemically meaningful reaction-transport systems remain limited. We apply…

Chemical Physics · Physics 2026-03-06 Andrew Millard , Henrik Pedersen

Traditional chemical kinetics may be inappropriate to describe chemical reactions in micro-domains involving only a small number of substrate and reactant molecules. Starting with the stochastic dynamics of the molecules, we derive a…

Mathematical Physics · Physics 2009-11-10 D. Holcman , Z. Schuss

We present a simplified model of the atmosphere of a terrestrial planet as an open two-dimensional system described by an ideal gas with velocity $\vec{v}$, density $\rho$ and temperature $T$ fields. Starting with the Chern-Simons equations…

Atmospheric and Oceanic Physics · Physics 2022-12-29 Martín Jacques-Coper , Valentina Ortiz , Jorge Zanelli

A wavelet-like model for distributions of objects in natural and man-made terrestrial environments is developed. The model is constructed in a self-similar fashion, with the sizes, amplitudes, and numbers of objects occurring at a constant…

Data Analysis, Statistics and Probability · Physics 2013-12-20 D. Keith Wilson , Chris L. Pettit , Sergey N. Vecherin

We suggest that the broad distribution of time scales in financial markets could be a crucial ingredient to reproduce realistic price dynamics in stylised Agent-Based Models. We propose a fractional reaction-diffusion model for the dynamics…

Mathematical Finance · Quantitative Finance 2018-03-14 Michael Benzaquen , Jean-Philippe Bouchaud