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In order to model entanglements of polymers in a confined region, we consider the linking numbers and writhes of cycles in random linear embeddings of complete graphs in a cube. Our main results are that for a random linear embedding of…

Geometric Topology · Mathematics 2016-02-02 Erica Flapan , Kenji Kozai

A book embedding of a graph consists of an embedding of its vertices along the spine of a book, and an embedding of its edges on the pages such that edges embedded on the same page do not intersect. The pagenumber is the minimum number of…

Combinatorics · Mathematics 2020-03-31 Zeling Shao , Chunjin Ren , Zhiguo Li

In this paper, we study random embeddings of polymer networks distributed according to any potential energy which can be expressed in terms of distances between pairs of monomers. This includes freely jointed chains, steric effects,…

Statistical Mechanics · Physics 2022-05-19 Jason Cantarella , Tetsuo Deguchi , Clayton Shonkwiler , Erica Uehara

We consider the number of crossings in a graph which is embedded randomly on a convex set of points. We give an estimate to the normal distribution in Kolmogorov distance which implies a convergence rate of order $n^{-1/2}$ for various…

Combinatorics · Mathematics 2022-08-26 Santiago Arenas-Velilla , Octavio Arizmendi

In a random linear graph, vertices are points on a line, and pairs of vertices are connected, independently, with a link probability that decreases with distance. We study the problem of reconstructing the linear embedding from the graph,…

Combinatorics · Mathematics 2020-05-25 Israel Rocha , Jeannette Janssen , Nauzer Kalyaniwalla

Spatial networks are networks where nodes are located in a space equipped with a metric. Typically, the space is two-dimensional and until recently and traditionally, the metric that was usually considered was the Euclidean distance. In…

Combinatorics · Mathematics 2022-11-29 Ramon Ferrer-i-Cancho

An embedding of a graph in a book, called book embedding, consists of a linear ordering of its vertices along the spine of the book and an assignment of its edges to the pages of the book, so that no two edges on the same page cross. The…

Suppose we have an embedding of a graph $\mathbf{G}$ created by subdividing the edges of a simpler graph $\mathbf{G'}$. The edges of $\mathbf{G}$ can be divided into subsets which join pairs of ``junction'' vertices in $\mathbf{G'}$. The…

Combinatorics · Mathematics 2024-09-30 Jason Cantarella , Henrik Schumacher , Clayton Shonkwiler

Random geometric graphs are random graph models defined on metric measure spaces. A random geometric graph is generated by first sampling points from a metric space and then connecting each pair of sampled points independently with a…

Probability · Mathematics 2025-11-10 Han Huang , Pakawut Jiradilok , Elchanan Mossel

We consider intrinsic linking and knotting in the context of directed graphs. We construct an example of a directed graph that contains a consistently oriented knotted cycle in every embedding. We also construct examples of intrinsically…

Geometric Topology · Mathematics 2017-12-29 Thomas Fleming , Joel Foisy

A graph is called (generically) rigid in $\mathbb{R}^d$ if, for any choice of sufficiently generic edge lengths, it can be embedded in $\mathbb{R}^d$ in a finite number of distinct ways, modulo rigid transformations. Here we deal with the…

Computational Geometry · Computer Science 2017-01-26 Ioannis Z. Emiris , Ioannis Psarros

This paper studies the linking numbers of random links within the grid model. The linking number is treated as a random variable on the isotopy classes of 2-component links, with the paper exploring its asymptotic growth as the diagram size…

Geometric Topology · Mathematics 2025-06-04 Senja Barthel , Yuka Kotorii

A very popular class of models for networks posits that each node is represented by a point in a continuous latent space, and that the probability of an edge between nodes is a decreasing function of the distance between them in this latent…

Statistics Theory · Mathematics 2025-01-07 Cosma Rohilla Shalizi , Dena Marie Asta

Let $w:[0,1]^2\rightarrow [0,1]$ be a symmetric function, and consider the random process $G(n,w)$, where vertices are chosen from $[0,1]$ uniformly at random, and $w$ governs the edge formation probability. Such a random graph is said to…

Combinatorics · Mathematics 2016-09-15 Huda Chuangpishit , Mahya Ghandehari , Jeannette Janssen

The diameter of a graph measures the maximal distance between any pair of vertices. The diameters of many small-world networks, as well as a variety of other random graph models, grow logarithmically in the number of nodes. In contrast, the…

Combinatorics · Mathematics 2011-04-05 Jens Marklof , Andreas Strömbergsson

An embedding of a graph in $3$-space is linkless if for every two disjoint cycles there exists an embedded ball that contains one of the cycles and is disjoint from the other. We prove that every bipartite linklessly embeddable (simple)…

Combinatorics · Mathematics 2020-01-01 Rose McCarty , Robin Thomas

Graph embeddings, wherein the nodes of the graph are represented by points in a continuous space, are used in a broad range of Graph ML applications. The quality of such embeddings crucially depends on whether the geometry of the space…

Machine Learning · Statistics 2022-02-03 Francesco Di Giovanni , Giulia Luise , Michael Bronstein

In a book embedding of a graph G, the vertices of G are placed in order along a straight-line called spine of the book, and the edges of G are drawn on a set of half-planes, called the pages of the book, such that two edges drawn on a page…

Computational Geometry · Computer Science 2015-10-21 Md. Jawaherul Alam , Franz J. Brandenburg , Stephen G. Kobourov

Suppose that there is a family of $n$ random points $X_v$ for $v \in V$, independently and uniformly distributed in the square $\left[-\sqrt{n}/2,\sqrt{n}/2\right]^2$ of area $n$. We do not see these points, but learn about them in one of…

Probability · Mathematics 2019-11-26 Josep Diaz , Colin McDiarmid , Dieter Mitsche

The Wiener index of a connected graph is the sum of the distances between all unordered pairs of vertices. A connected graph is Eulerian if its vertex degrees are all even. In [Gutman, Cruz, Rada, Wiener index of Eulerian Graphs, Discrete…

Combinatorics · Mathematics 2021-01-22 Peter Dankelmann
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