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In this paper we investigate the colorful components framework, motivated by applications emerging from comparative genomics. The general goal is to remove a collection of edges from an undirected vertex-colored graph $G$ such that in the…

Data Structures and Algorithms · Computer Science 2013-11-07 Anna Adamaszek , Alexandru Popa

Assuming that P is not equal to NP, the worst-case run time of any algorithm solving an NP-complete problem must be super-polynomial. But what is the fastest run time we can get? Before one can even hope to approach this question, a more…

Data Structures and Algorithms · Computer Science 2026-01-09 Jesper Nederlof

We introduce techniques for proving superlinear conditional lower bounds for polynomial time problems. In particular, we show that CircuitSAT for circuits with m gates and log(m) inputs (denoted by log-CircuitSAT) is not decidable in…

Computational Complexity · Computer Science 2022-05-18 András Z. Salamon , Michael Wehar

The Maximum Matching problem has a quantum query complexity lower bound of $\Omega(n^{3/2})$ for graphs on $n$ vertices represented by an adjacency matrix. The current best quantum algorithm has the query complexity $O(n^{7/4})$, which is…

Quantum Physics · Physics 2025-10-31 Alcides Gomes Andrade Júnior , Akira Matsubayashi

We present algorithms for length-constrained maximum sum segment and maximum density segment problems, in particular, and the problem of finding length-constrained heaviest segments, in general, for a sequence of real numbers. Given a…

Computational Geometry · Computer Science 2015-03-19 Md. Shafiul Alam , Asish Mukhopadhyay

Over the past decade, we witness an increasing amount of interest in the design of exact exponential-time and parameterized algorithms for problems in Graph Drawing. Unfortunately, we still lack knowledge of general methods to develop such…

Data Structures and Algorithms · Computer Science 2023-10-10 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

We prove the following theorem. Given a planar graph $G$ and an integer $k$, it is possible in polynomial time to randomly sample a subset $A$ of vertices of $G$ with the following properties: (i) $A$ induces a subgraph of $G$ of treewidth…

Data Structures and Algorithms · Computer Science 2016-04-21 Fedor V. Fomin , Daniel Lokshtanov , Dániel Marx , Marcin Pilipczuk , Michał Pilipczuk , Saket Saurabh

Basic path-matchings, introduced by Cunningham and Geelen (FOCS 1996), are a common generalization of matroid intersection and non-bipartite matching. The main results of this paper are a new algebraic characterization of basic…

Data Structures and Algorithms · Computer Science 2007-05-23 Nicholas J. A. Harvey

We establish a parametric framework for obtaining obstruction characterizations of graph parameters with respect to a quasi-ordering $\leqslant$ on graphs. At the center of this framework lies the concept of a $\leqslant$-parametric graph:…

Combinatorics · Mathematics 2024-11-26 Christophe Paul , Evangelos Protopapas , Dimitrios M. Thilikos

We study the minimum number of constraints needed to formulate random instances of the maximum stable set problem via linear programs (LPs), in two distinct models. In the uniform model, the constraints of the LP are not allowed to depend…

Computational Complexity · Computer Science 2016-10-26 Gábor Braun , Samuel Fiorini , Sebastian Pokutta

The exponential-time hypothesis (ETH) states that 3-SAT is not solvable in subexponential time, i.e. not solvable in O(c^n) time for arbitrary c > 1, where n denotes the number of variables. Problems like k-SAT can be viewed as special…

Computational Complexity · Computer Science 2017-06-20 Peter Jonsson , Victor Lagerkvist , Biman Roy

In this paper we study the problem of finding a small safe set $S$ in a graph $G$, i.e. a non-empty set of vertices such that no connected component of $G[S]$ is adjacent to a larger component in $G - S$. We enhance our understanding of the…

Computational Complexity · Computer Science 2019-02-01 Rémy Belmonte , Tesshu Hanaka , Ioannis Katsikarelis , Michael Lampis , Hirotaka Ono , Yota Otachi

Many combinatorial problems can be solved in time $O^*(c^{tw})$ on graphs of treewidth $tw$, for a problem-specific constant $c$. In several cases, matching upper and lower bounds on $c$ are known based on the Strong Exponential Time…

Computational Complexity · Computer Science 2018-06-28 Bas A. M. van Geffen , Bart M. P. Jansen , Arnoud A. W. M. de Kroon , Rolf Morel

Many graph problems were first shown to be fixed-parameter tractable using the results of Robertson and Seymour on graph minors. We show that the combination of finite, computable, obstruction sets and efficient order tests is not just one…

Computational Complexity · Computer Science 2013-05-15 Michael R. Fellows , Bart M. P. Jansen

This paper considers a natural fault-tolerant shortest paths problem: for some constant integer $f$, given a directed weighted graph with no negative cycles and two fixed vertices $s$ and $t$, compute (either explicitly or implicitly) for…

Data Structures and Algorithms · Computer Science 2022-09-16 Virginia Vassilevska Williams , Eyob Woldeghebriel , Yinzhan Xu

We consider the SUBSET SUM problem and its important variants in this paper. In the SUBSET SUM problem, a (multi-)set $X$ of $n$ positive numbers and a target number $t$ are given, and the task is to find a subset of $X$ with the maximal…

Data Structures and Algorithms · Computer Science 2022-12-07 Xiaoyu Wu , Lin Chen

Given two strings $S$ and $P$, the Episode Matching problem is to find the shortest substring of $S$ that contains $P$ as a subsequence. The best known upper bound for this problem is $\tilde O(nm)$ by Das et al. (1997) , where $n,m$ are…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Shay Mozes , Teresa Anna Steiner , Oren Weimann

We construct a family of planar graphs $\{G_n\}_{n\geq 4}$, where $G_n$ has $n$ vertices including a source vertex $s$ and a sink vertex $t$, and edge weights that change linearly with a parameter $\lambda$ such that, as $\lambda$ varies in…

Computational Complexity · Computer Science 2019-06-20 Kshitij Gajjar , Jaikumar Radhakrishnan

Many problems are NP-hard and, unless P = NP, do not admit polynomial-time exact algorithms. The fastest known exact algorithms exactly usually take time exponential in the input size. Much research effort has gone into obtaining faster…

Data Structures and Algorithms · Computer Science 2025-01-27 Stefan Kratsch , Pascal Kunz

In undirected graphs with real non-negative weights, we give a new randomized algorithm for the single-source shortest path (SSSP) problem with running time $O(m\sqrt{\log n \cdot \log\log n})$ in the comparison-addition model. This is the…

Data Structures and Algorithms · Computer Science 2023-10-05 Ran Duan , Jiayi Mao , Xinkai Shu , Longhui Yin
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