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Relative Lempel-Ziv (RLZ) parsing is a dictionary compression method in which a string $S$ is compressed relative to a second string $R$ (called the reference) by parsing $S$ into a sequence of substrings that occur in $R$. RLZ is…

Data Structures and Algorithms · Computer Science 2022-08-25 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

With ever-increasing volumes of scientific data produced by HPC applications, significantly reducing data size is critical because of limited capacity of storage space and potential bottlenecks on I/O or networks in writing/reading or…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-08 Dingwen Tao , Sheng Di , Xin Liang , Zizhong Chen , Franck Cappello

We propose and study a family of universal sequential probability assignments on individual sequences, based on the incremental parsing procedure of the Lempel-Ziv (LZ78) compression algorithm. We show that the normalized log loss under any…

Information Theory · Computer Science 2025-12-15 Naomi Sagan , Tsachy Weissman

In a distributed information application an encoder compresses an arbitrary vector while a similar reference vector is available to the decoder as side information. For the Hamming-distance similarity measure, and when guaranteed perfect…

Information Theory · Computer Science 2020-09-08 Yuval Cassuto , Jacob Ziv

Universally achievable error exponents pertaining to certain families of channels (most notably, discrete memoryless channels (DMC's)), and various ensembles of random codes, are studied by combining the competitive minimax approach,…

Information Theory · Computer Science 2007-08-01 Yaniv Akirav , Neri Merhav

Compression techniques that support fast random access are a core component of any information system. Current state-of-the-art methods group documents into fixed-sized blocks and compress each block with a general-purpose adaptive…

Data Structures and Algorithms · Computer Science 2015-03-19 Christopher Hoobin , Simon J. Puglisi , Justin Zobel

Indexing highly repetitive collections has become a relevant problem with the emergence of large repositories of versioned documents, among other applications. These collections may reach huge sizes, but are formed mostly of documents that…

Information Retrieval · Computer Science 2016-05-25 Francisco Claude , Antonio Fariña , Miguel A. Martínez-Prieto , Gonzalo Navarro

Traditionally, ensembles of Slepian-Wolf (SW) codes are defined such that every bin of each $n$-vector of each source is randomly drawn under the uniform distribution across the sets $\{0,1,\ldots,2^{nR_X}-1\}$ and…

Information Theory · Computer Science 2020-09-21 Neri Merhav

The problem of joint universal source coding and modeling, addressed by Rissanen in the context of lossless codes, is generalized to fixed-rate lossy coding of continuous-alphabet memoryless sources. We show that, for bounded distortion…

Information Theory · Computer Science 2016-11-15 Maxim Raginsky

Ensemble methods are among the state-of-the-art predictive modeling approaches. Applied to modern big data, these methods often require a large number of sub-learners, where the complexity of each learner typically grows with the size of…

Machine Learning · Computer Science 2018-10-29 Amichai Painsky , Saharon Rosset

Relative Lempel-Ziv (RLZ) is a popular algorithm for compressing databases of genomes from individuals of the same species when fast random access is desired. With Kuruppu et al.'s (SPIRE 2010) original implementation, a reference genome is…

Data Structures and Algorithms · Computer Science 2016-05-17 Anthony J. Cox , Andrea Farruggia , Travis Gagie , Simon J. Puglisi , Jouni Sirén

In this paper, we consider the mismatched rate-distortion problem, in which the encoding is done using a codebook, and the encoder chooses the minimum-distortion codeword according to a mismatched distortion function that differs from the…

Information Theory · Computer Science 2022-12-20 Millen Kanabar , Jonathan Scarlett

We study a random code ensemble with a hierarchical structure, which is closely related to the generalized random energy model with discrete energy values. Based on this correspondence, we analyze the hierarchical random code ensemble by…

Disordered Systems and Neural Networks · Physics 2011-02-08 Tomoyuki Obuchi , Kazutaka Takahashi , Koujin Takeda

We begin by presenting a simple lossy compressor operating at near-zero rate: The encoder merely describes the indices of the few maximal source components, while the decoder's reconstruction is a natural estimate of the source components…

Information Theory · Computer Science 2016-03-09 Albert No , Tsachy Weissman

In lossy compression, Wang et al. [1] recently introduced the rate-distortion-perception-classification function, which supports multi-task learning by jointly optimizing perceptual quality, classification accuracy, and reconstruction…

Information Theory · Computer Science 2025-04-23 Nam Nguyen , Thuan Nguyen , Thinh Nguyen , Bella Bose

In this paper we compare the difference in performance of two of the Prediction by Partial Matching (PPM) family of compressors (PPM$^*$ and the original Bounded PPM algorithm) and the Lempel-Ziv 78 (LZ) algorithm. We construct an infinite…

Data Structures and Algorithms · Computer Science 2021-01-21 Liam Jordon , Philippe Moser

This paper presents prefix codes which minimize various criteria constructed as a convex combination of maximum codeword length and average codeword length or maximum redundancy and average redundancy, including a convex combination of the…

Information Theory · Computer Science 2011-02-11 Charalambos D. Charalambous , Themistoklis Charalambous , Farzad Rezaei

This paper studies fixed-rate randomized vector quantization under the constraint that the quantizer's output has a given fixed probability distribution. A general representation of randomized quantizers that includes the common models in…

Information Theory · Computer Science 2016-11-15 Naci Saldi , Tamás Linder , Serdar Yüksel

One of the most famous and investigated lossless data-compression scheme is the one introduced by Lempel and Ziv about 40 years ago. This compression scheme is known as "dictionary-based compression" and consists of squeezing an input…

Data Structures and Algorithms · Computer Science 2008-02-07 Paolo Ferragina , Igor Nitto , Rossano Venturini

We consider the topic of universal decoding with a decoder that does not have direct access to the codebook, but only to noisy versions of the various randomly generated codewords, a problem motivated by biometrical identification systems.…

Information Theory · Computer Science 2016-09-05 Neri Merhav