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To reduce human annotations for relation extraction (RE) tasks, distantly supervised approaches have been proposed, while struggling with low performance. In this work, we propose a novel DSRE-NLI framework, which considers both distant…

Computation and Language · Computer Science 2022-08-02 Kang Zhou , Qiao Qiao , Yuepei Li , Qi Li

Recent research efforts have explored the potential of leveraging natural language inference (NLI) techniques to enhance relation extraction (RE). In this vein, we introduce MetaEntailRE, a novel adaptation method that harnesses NLI…

Computation and Language · Computer Science 2025-03-10 William Hogan , Jingbo Shang

Natural language inference (NLI) is critical for complex decision-making in biomedical domain. One key question, for example, is whether a given biomedical mechanism is supported by experimental evidence. This can be seen as an NLI problem…

Computation and Language · Computer Science 2022-10-27 Mohaddeseh Bastan , Mihai Surdeanu , Niranjan Balasubramanian

We revisit the reference determinacy (RD) assumption in the task of natural language inference (NLI), i.e., the premise and hypothesis are assumed to refer to the same context when human raters annotate a label. While RD is a practical…

Computation and Language · Computer Science 2025-02-11 Sihao Chen , Chaitanya Malaviya , Alex Fabrikant , Hagai Taitelbaum , Tal Schuster , Senaka Buthpitiya , Dan Roth

Biological relation networks contain rich information for understanding the biological mechanisms behind the relationship of entities such as genes, proteins, diseases, and chemicals. The vast growth of biomedical literature poses…

Computation and Language · Computer Science 2025-01-27 Po-Ting Lai , Chih-Hsuan Wei , Shubo Tian , Robert Leaman , Zhiyong Lu

Document-Level Biomedical Relation Extraction (Bio-RE) aims to identify relations between biomedical entities within extensive texts, serving as a crucial subfield of biomedical text mining. Existing Bio-RE methods struggle with…

Computation and Language · Computer Science 2025-01-10 Yufei Shang , Yanrong Guo , Shijie Hao , Richang Hong

Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on…

Computation and Language · Computer Science 2022-07-20 Ling Luo , Po-Ting Lai , Chih-Hsuan Wei , Cecilia N Arighi , Zhiyong Lu

Relation extraction (RE) is a core task in natural language processing. Traditional approaches typically frame RE as a supervised learning problem, directly mapping context to labels-an approach that often suffers from poor out-of-domain…

Computation and Language · Computer Science 2025-08-07 Runpeng Dai , Tong Zheng , Run Yang , Kaixian Yu , Hongtu Zhu

Relation Extraction (RE) aims to label relations between groups of marked entities in raw text. Most current RE models learn context-aware representations of the target entities that are then used to establish relation between them. This…

Computation and Language · Computer Science 2019-02-26 Gaurav Singh , Parminder Bhatia

For Relation Extraction (RE), the manual annotation of training data may be prohibitively expensive, since the sentences that contain the target relations in texts can be very scarce and difficult to find. It is therefore beneficial to…

Computation and Language · Computer Science 2025-09-11 Zexuan Li , Hongliang Dai , Piji Li

Biomedical relation extraction (RE) is the task of automatically identifying and characterizing relations between biomedical concepts from free text. RE is a central task in biomedical natural language processing (NLP) research and plays a…

Computation and Language · Computer Science 2023-06-21 Po-Ting Lai , Chih-Hsuan Wei , Ling Luo , Qingyu Chen , Zhiyong Lu

How can we interpret and retrieve medical evidence to support clinical decisions? Clinical trial reports (CTR) amassed over the years contain indispensable information for the development of personalized medicine. However, it is practically…

Computation and Language · Computer Science 2023-10-31 Maël Jullien , Marco Valentino , Hannah Frost , Paul O'Regan , Donal Landers , André Freitas

The surging amount of biomedical literature & digital clinical records presents a growing need for text mining techniques that can not only identify but also semantically relate entities in unstructured data. In this paper we propose a text…

Computation and Language · Computer Science 2021-12-28 Hasham Ul Haq , Veysel Kocaman , David Talby

Relation extraction in the biomedical domain is challenging due to the lack of labeled data and high annotation costs, needing domain experts. Distant supervision is commonly used to tackle the scarcity of annotated data by automatically…

Computation and Language · Computer Science 2022-09-14 Saadullah Amin , Pasquale Minervini , David Chang , Pontus Stenetorp , Günter Neumann

Low-resource Relation Extraction (LRE) aims to extract relation facts from limited labeled corpora when human annotation is scarce. Existing works either utilize self-training scheme to generate pseudo labels that will cause the gradual…

Computation and Language · Computer Science 2021-09-15 Xuming Hu , Chenwei Zhang , Yawen Yang , Xiaohe Li , Li Lin , Lijie Wen , Philip S. Yu

Modern NLP systems require high-quality annotated data. In specialized domains, expert annotations may be prohibitively expensive. An alternative is to rely on crowdsourcing to reduce costs at the risk of introducing noise. In this paper we…

Computation and Language · Computer Science 2019-05-21 Yinfei Yang , Oshin Agarwal , Chris Tar , Byron C. Wallace , Ani Nenkova

State of the art models using deep neural networks have become very good in learning an accurate mapping from inputs to outputs. However, they still lack generalization capabilities in conditions that differ from the ones encountered during…

Computation and Language · Computer Science 2018-08-28 Alexey Romanov , Chaitanya Shivade

Crowdworker-constructed natural language inference (NLI) datasets have been found to contain statistical artifacts associated with the annotation process that allow hypothesis-only classifiers to achieve better-than-random performance…

Computation and Language · Computer Science 2021-06-04 Christine Herlihy , Rachel Rudinger

Named Entity Recognition (NER) and Relation Extraction (RE) are essential tools in distilling knowledge from biomedical literature. This paper presents our findings from participating in BioNLP Shared Tasks 2019. We addressed Named Entity…

Computation and Language · Computer Science 2019-10-09 Usama Yaseen , Pankaj Gupta , Hinrich Schütze

Scientific Natural Language Inference (NLI) is the task of predicting the semantic relation between a pair of sentences extracted from research articles. The automatic annotation method based on distant supervision for the training set of…

Computation and Language · Computer Science 2024-06-24 Mobashir Sadat , Cornelia Caragea
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