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Related papers: The sub-diffusive behavior of chromatin in changin…

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This paper is concerned with a non-homogeneous in space and non-local in time random walk model for anomalous subdiffusive transport of cells. Starting with a Markov model involving a structured probability density function, we derive the…

Statistical Mechanics · Physics 2013-02-21 S. Fedotov , A. O. Ivanov , A. Y. Zubarev

We study the transport properties of a system of active particles moving at constant speed in an heterogeneous two-dimensional space. The spatial heterogeneity is modeled by a random distribution of obstacles, which the active particles…

Biological Physics · Physics 2013-10-23 Oleksandr Chepizhko , Fernando Peruani

Based on a coarse-grained model, we carry out molecular dynamics simulations to analyze the diffusion of a small tracer particle inside a cylindrical channel whose inner wall is covered with randomly grafted short polymeric chains. We…

Soft Condensed Matter · Physics 2013-06-20 Rajarshi Chakrabarti , Stefan Kesselheim , Peter Kosovan , Christian Holm

A survey is presented of the dynamic features of non-itinerant off-center defects in crystals, such as rotation-like reorientation of isolated species by either impurity or host ions. The occurrence of off-center displacements in…

Chemical Physics · Physics 2008-12-12 Mladen Georgiev

The diffusion type is determined not only by microscopic dynamics but also by the environment properties. For example, the environment's fractal structure is responsible for the emergence of subdiffusive scaling of the mean square…

Statistical Mechanics · Physics 2021-10-26 Piotr Kubala , Michał Cieśla , Bartłomiej Dybiec

Propagating intrinsic localised modes (discrete breathers) exist in the dissipative driven sine-Gordon chain as attractors of the dynamics. Thermal fluctuations induce random transitions between attracting configurations corresponding to…

Pattern Formation and Solitons · Physics 2007-05-23 Matthias Meister , Luis Vázquez

Analytic solution is given in the steady state limit for the system of Master equations describing a random walk on one-dimensional periodic lattices with arbitrary hopping rates containing one mobile, directional impurity (defect bond).…

Statistical Mechanics · Physics 2009-10-28 Z. Toroczkai , R. K. P. Zia

We use Brownian dynamics simulations to study the formation of chromatin loops through diffusive sliding of slip-link-like proteins, mimicking the behaviour of cohesin molecules. We recently proposed that diffusive sliding is sufficient to…

Soft Condensed Matter · Physics 2020-11-02 Andrea Bonato , Chris A. Brackley , James Johnson , Davide Michieletto , Davide Marenduzzo

We introduce a diffusion model for energetically inhomogeneous systems. A random walker moves on a spin-S Ising configuration, which generates the energy landscape on the lattice through the nearest-neighbors interaction. The underlying…

Statistical Mechanics · Physics 2008-06-17 E. Agliari , R. Burioni , D. Cassi , A. Vezzani

During the eukaryotic cell cycle, chromatin undergoes several conformational changes, which are believed to play key roles in gene expression regulation during interphase, and in genome replication and division during mitosis. In this…

Subcellular Processes · Quantitative Biology 2007-09-03 Julien Mozziconacci , Christophe Lavelle , Maria Barbi , Annick Lesne , Jean-Marc Victor

We have investigated the nature of the dynamical behaviour in low autocorrelation binary sequences. These models do have a glass transition $T_G$ of a purely dynamical nature. Above the glass transition the dynamics is not fully ergodic and…

Condensed Matter · Physics 2009-10-22 Gabriele Migliorini , Felix Ritort

We consider a simple linear reversible isomerization reaction A <--> B under subdiffusion described by continuous time random walks (CTRW). The reactants' transformations take place independently on the motion and are described by constant…

Statistical Mechanics · Physics 2009-11-13 F. Sagues , V. P. Shkilev , I. M. Sokolov

We have identified an important source of mixing in stellar radiation zones, that would arise whenever two conditions are satisfied: (1) the presence of an inverse vertical compositional gradient, and (2) the presence of…

Solar and Stellar Astrophysics · Physics 2015-06-22 Michael Medrano , Pascale Garaud , Stephan Stellmach

We study the anomalous transport in systems of random walks (RW's) on comb-like lattices with fractal sidebranches, showing subdiffusion, and in a system of Brownian particles driven by a random shear along the x-direction, showing a…

Statistical Mechanics · Physics 2022-06-15 Fabio Cecconi , Giulio Costantini , Alessandro Taloni , Angelo Vulpiani

We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t^(1/2) in all directions. Two…

Soft Condensed Matter · Physics 2017-12-15 G Passucci , ME Brasch , JH Henderson , V Zaburdaev , ML Manning

Diffusion of dopants in rutile is the fundamental process that determines the performance of many devices in which rutile is used. The diffusion behavior is known to be highly sample-dependent, but the reasons for this are less well…

Materials Science · Physics 2017-08-09 Linggang Zhu , Graeme J. Ackland , Qing-Miao Hu , Jian Zhou , Zhimei Sun

This paper presents an analytical study of the coexistence of different transport regimes in quasi-one-dimensional surface-disordered waveguides (or electron conductors). To elucidate main features of surface scattering, the case of two…

Statistical Mechanics · Physics 2015-05-20 M. Rendón , N. M. Makarov , F. M. Izrailev

In a retroreflective scheme atomic Raman diffraction adopts some of the properties of Bragg diffraction due to additional couplings to off-resonant momenta. As a consequence, double Raman diffraction has to be performed in a Bragg-type…

Quantum Physics · Physics 2022-09-08 Sabrina Hartmann , Jens Jenewein , Sven Abend , Albert Roura , Enno Giese

We study the persistent random walk of photons on a one-dimensional lattice of random transmittances. Transmittances at different sites are assumed independent, distributed according to a given probability density $f(t)$. Depending on the…

Statistical Mechanics · Physics 2007-05-23 MirFaez Miri , Zeinab Sadjadi , M. Ebrahim Fouladvand

We quantify superdiffusive transience for a two-dimensional random walk in which the vertical coordinate is a martingale and the horizontal coordinate has a positive drift that is a polynomial function of the individual coordinates and of…

Probability · Mathematics 2024-07-03 Conrado da Costa , Mikhail Menshikov , Vadim Shcherbakov , Andrew Wade