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Named entity recognition (NER) and relation extraction (RE) are two important tasks in information extraction and retrieval (IE \& IR). Recent work has demonstrated that it is beneficial to learn these tasks jointly, which avoids the…

Computation and Language · Computer Science 2020-01-01 John Giorgi , Xindi Wang , Nicola Sahar , Won Young Shin , Gary D. Bader , Bo Wang

Deep neural models for named entity recognition (NER) have shown impressive results in overcoming label scarcity and generalizing to unseen entities by leveraging distant supervision and auxiliary information such as explanations. However,…

Pretrained using large amount of data, autoregressive language models are able to generate high quality sequences. However, these models do not perform well under hard lexical constraints as they lack fine control of content generation…

Computation and Language · Computer Science 2021-03-18 Lee-Hsun Hsieh , Yang-Yin Lee , Ee-Peng Lim

While named entity recognition (NER) is a key task in natural language processing, most approaches only target flat entities, ignoring nested structures which are common in many scenarios. Most existing nested NER methods traverse all…

Computation and Language · Computer Science 2021-07-21 Huiqiang Jiang , Guoxin Wang , Weile Chen , Chengxi Zhang , Börje F. Karlsson

Metagenomic studies have increasingly utilized sequencing technologies in order to analyze DNA fragments found in environmental samples.One important step in this analysis is the taxonomic classification of the DNA fragments. Conventional…

Genomics · Quantitative Biology 2020-02-11 Andreas Georgiou , Vincent Fortuin , Harun Mustafa , Gunnar Rätsch

Adapting Large Language Models (LLMs) to a continuous stream of tasks is a critical yet challenging endeavor. While Parameter-Efficient Fine-Tuning (PEFT) methods have become a standard for this, they face a fundamental dilemma in continual…

Machine Learning · Computer Science 2025-11-11 Haeyong Kang

Entity retrieval, which aims at disambiguating mentions to canonical entities from massive KBs, is essential for many tasks in natural language processing. Recent progress in entity retrieval shows that the dual-encoder structure is a…

Computation and Language · Computer Science 2021-09-14 Xinyin Ma , Yong Jiang , Nguyen Bach , Tao Wang , Zhongqiang Huang , Fei Huang , Weiming Lu

Fine-Grained Named Entity Typing (FG-NET) aims at classifying the entity mentions into a wide range of entity types (usually hundreds) depending upon the context. While distant supervision is the most common way to acquire supervised…

Computation and Language · Computer Science 2022-06-22 Muhammad Asif Ali , Yifang Sun , Bing Li , Wei Wang

Machine- and deep-learning approaches for biological sequences depend critically on transforming raw DNA, RNA, and protein FASTA files into informative numerical representations. However, this process is often fragmented across multiple…

Genomics · Quantitative Biology 2025-12-01 Hamid Ismail , Marwan Bikdash

Named entity recognition (NER) remains challenging when entity mentions can be discontinuous. Existing methods break the recognition process into several sequential steps. In training, they predict conditioned on the golden intermediate…

Computation and Language · Computer Science 2021-11-29 Yucheng Wang , Bowen Yu , Hongsong Zhu , Tingwen Liu , Nan Yu , Limin Sun

Context-aware compression techniques have gained increasing attention as model sizes continue to grow, introducing computational bottlenecks that hinder efficient deployment. A structured encoding approach was proposed to selectively…

Computation and Language · Computer Science 2025-02-13 Barnaby Schmitt , Alistair Grosvenor , Matthias Cunningham , Clementine Walsh , Julius Pembrokeshire , Jonathan Teel

Sequential recommendation (SR) systems excel at capturing users' dynamic preferences by leveraging their interaction histories. Most existing SR systems assign a single embedding vector to each item to represent its features, adopting…

Information Retrieval · Computer Science 2026-01-21 Mingrui Liu , Sixiao Zhang , Cheng Long

The growth of cross-lingual pre-trained models has enabled NLP tools to rapidly generalize to new languages. While these models have been applied to tasks involving entities, their ability to explicitly predict typological features of these…

Computation and Language · Computer Science 2021-10-18 Nila Selvaraj , Yasumasa Onoe , Greg Durrett

A mainstream type of current self-supervised learning methods pursues a general-purpose representation that can be well transferred to downstream tasks, typically by optimizing on a given pretext task such as instance discrimination. In…

Computer Vision and Pattern Recognition · Computer Science 2022-10-21 Xin Liu , Zhongdao Wang , Yali Li , Shengjin Wang

In this paper, we present ELEET, a novel execution engine that allows one to seamlessly query and process text as a first-class citizen along with tables. To enable such a seamless integration of text and tables, ELEET leverages learned…

Databases · Computer Science 2024-10-31 Matthias Urban , Carsten Binnig

Referring image segmentation aims at segmenting the foreground masks of the entities that can well match the description given in the natural language expression. Previous approaches tackle this problem using implicit feature interaction…

Computer Vision and Pattern Recognition · Computer Science 2020-10-02 Shaofei Huang , Tianrui Hui , Si Liu , Guanbin Li , Yunchao Wei , Jizhong Han , Luoqi Liu , Bo Li

We introduce a hybrid human-automated system that provides scalable entity-risk relation extractions across large data sets. Given an expert-defined keyword taxonomy, entities, and data sources, the system returns text extractions based on…

Computation and Language · Computer Science 2019-09-24 Berk Ekmekci , Eleanor Hagerman , Blake Howald

An entity mention in text such as "Washington" may correspond to many different named entities such as the city "Washington D.C." or the newspaper "Washington Post." The goal of named entity disambiguation is to identify the mentioned named…

Computation and Language · Computer Science 2023-06-22 Arda Çelebi , Arzucan Özgür

Mixture-of-Experts (MoE) has become the dominant architecture for scaling large language models: frontier models routinely decouple total parameters from per-token computation through sparse expert routing. Scaling laws show that under…

Machine Learning · Computer Science 2026-05-12 Chaitanya Dwivedi , Binxuan Huang , Himanshu Gupta , Pratik Jayarao , Neeraj Varshney , Bing Yin

Nested named entity recognition (nested NER) is a fundamental task in natural language processing. Various span-based methods have been proposed to detect nested entities with span representations. However, span-based methods do not…

Computation and Language · Computer Science 2022-09-07 Shuhui Wu , Yongliang Shen , Zeqi Tan , Weiming Lu
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