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With the large volume of unstructured data that increases constantly on the web, the motivation of representing the knowledge in this data in the machine-understandable form is increased. Ontology is one of the major cornerstones of…

Computation and Language · Computer Science 2021-05-10 Fatima N. AL-Aswadi , Huah Yong Chan , Keng Hoon Gan

Leveraging generative Artificial Intelligence (AI), we have transformed a dataset comprising 1,000 scientific papers into an ontological knowledge graph. Through an in-depth structural analysis, we have calculated node degrees, identified…

Machine Learning · Computer Science 2024-06-12 Markus J. Buehler

LexNLP is an open source Python package focused on natural language processing and machine learning for legal and regulatory text. The package includes functionality to (i) segment documents, (ii) identify key text such as titles and…

Computation and Language · Computer Science 2018-06-12 Michael J Bommarito , Daniel Martin Katz , Eric M Detterman

A systematic review identifies and collates various clinical studies and compares data elements and results in order to provide an evidence based answer for a particular clinical question. The process is manual and involves lot of time. A…

Information Retrieval · Computer Science 2016-06-22 Tanmay Basu , Shraman Kumar , Abhishek Kalyan , Priyanka Jayaswal , Pawan Goyal , Stephen Pettifer , Siddhartha R. Jonnalagadda

Laboratory workflows in pharmaceutical and biomedical research encode substantial tacit knowledge -- expert judgment about failure conditions, decision branching logic, and contextual dependencies -- that remains inaccessible to protocol…

The accelerating pace of research on autoregressive generative models has produced thousands of papers, making manual literature surveys and reproduction studies increasingly impractical. We present a fully open-source, reproducible…

Information Retrieval · Computer Science 2025-08-07 Faruk Alpay , Bugra Kilictas , Hamdi Alakkad

Citation parsing is fundamental for search engines within academia and the protection of intellectual property. Meticulous extraction is further needed when evaluating the similarity of documents and calculating their citation impact.…

Digital Libraries · Computer Science 2018-05-23 Niall Martin Ryan

A constantly growing amount of information is available through the web. Unfortunately, extracting useful content from this massive amount of data still remains an open issue. The lack of standard data models and structures forces…

Databases · Computer Science 2016-03-25 Juan M. Tirado , Ovidiu Serban , Qiang Guo , Eiko Yoneki

Research software (also called scientific software) is essential for advancing scientific endeavours. Research software encapsulates complex algorithms and domain-specific knowledge and is a fundamental component of all science. A pervasive…

Software Engineering · Computer Science 2026-03-24 Neil A. Ernst , Ahmed Musa Awon , Swapnil Hingmire , Ze Shi Li

Automatic processing of bibliographic data becomes very important in digital libraries, data science and machine learning due to its importance in keeping pace with the significant increase of published papers every year from one side and…

Digital Libraries · Computer Science 2021-06-24 Zeyd Boukhers , Philipp Mayr , Silvio Peroni

The scale and scope of scholarly articles today are overwhelming human researchers who seek to timely digest and synthesize knowledge. In this paper, we seek to develop natural language processing (NLP) models to accelerate the speed of…

Computation and Language · Computer Science 2020-06-17 Victor Zitian Chen , Felipe Montano-Campos , Wlodek Zadrozny

Identifying keyphrases (KPs) from text documents is a fundamental task in natural language processing and information retrieval. Vast majority of the benchmark datasets for this task are from the scientific domain containing only the…

Computation and Language · Computer Science 2022-04-04 Debanjan Mahata , Navneet Agarwal , Dibya Gautam , Amardeep Kumar , Swapnil Parekh , Yaman Kumar Singla , Anish Acharya , Rajiv Ratn Shah

Sustainable Development Goals (SDGs) bring together the diverse development community and provide a clear set of development targets for 2030. Given a large number of actors and initiatives related to these goals, there is a need to have a…

Digital Libraries · Computer Science 2020-06-01 Lukas Pukelis , Nuria Bautista Puig , Mykola Skrynik , Vilius Stanciauskas

Previous work for text summarization in scientific domain mainly focused on the content of the input document, but seldom considering its citation network. However, scientific papers are full of uncommon domain-specific terms, making it…

Computation and Language · Computer Science 2021-04-08 Chenxin An , Ming Zhong , Yiran Chen , Danqing Wang , Xipeng Qiu , Xuanjing Huang

Standing at the forefront of knowledge dissemination, digital libraries curate vast collections of scientific literature. However, these scholarly writings are often laden with jargon and tailored for domain experts rather than the general…

Computation and Language · Computer Science 2024-08-08 Haining Wang , Jason Clark

AI automation tools need machine-readable hyperparameter schemas to define their search spaces. At the same time, AI libraries often come with good human-readable documentation. While such documentation contains most of the necessary…

Machine Learning · Computer Science 2020-07-06 Guillaume Baudart , Peter D. Kirchner , Martin Hirzel , Kiran Kate

Clinical document metadata, such as document type, structure, author role, medical specialty, and encounter setting, is essential for accurate interpretation of information captured in clinical documents. However, vast documentation…

Computation and Language · Computer Science 2026-01-16 Kurt Miller , Qiuhao Lu , William Hersh , Kirk Roberts , Steven Bedrick , Andrew Wen , Hongfang Liu

Semantic legal metadata provides information that helps with understanding and interpreting legal provisions. Such metadata is therefore important for the systematic analysis of legal requirements. However, manually enhancing a large legal…

Software Engineering · Computer Science 2020-01-31 Amin Sleimi , Nicolas Sannier , Mehrdad Sabetzadeh , Lionel Briand , Marcello Ceci , John Dann

The trend toward open science increases the pressure on authors to provide access to the source code and data they used to compute the results reported in their scientific papers. Since sharing materials reproducibly is challenging, several…

Digital Libraries · Computer Science 2020-07-15 Markus Konkol , Daniel Nüst , Laura Goulier

Large language models (LLMs) are increasingly touted as powerful tools for automating scientific information extraction. However, existing methods and tools often struggle with the realities of scientific literature: long-context documents,…