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Given graphs $G$ and $H$, we propose a method to implicitly enumerate topological-minor-embeddings of $H$ in $G$ using decision diagrams. We show a useful application of our method to enumerating subgraphs characterized by forbidden…

Data Structures and Algorithms · Computer Science 2019-11-19 Yu Nakahata , Jun Kawahara , Takashi Horiyama , Shin-ichi Minato

This paper presents the novel `uniqueness tree' algorithm, as one possible method for determining whether two finite, undirected graphs are isomorphic. We prove that the algorithm has polynomial time complexity in the worst case, and that…

Discrete Mathematics · Computer Science 2016-06-22 Jonathan Gorard

A graph $G=(V,E)$ is a {\it unipolar graph} if there exits a partition $V=V_1 \cup V_2$ such that, $V_1$ is a clique and $V_2$ induces the disjoint union of cliques. The complement-closed class of {\it generalized split graphs} are those…

Discrete Mathematics · Computer Science 2013-09-24 Elaine M. Eschen , Xiaoqiang Wang

Understanding spatial correlation is vital in many fields including epidemiology and social science. Lee, Meeks and Pettersson (Stat. Comput. 2021) recently demonstrated that improved inference for areal unit count data can be achieved by…

Data Structures and Algorithms · Computer Science 2026-02-10 Jessica Enright , Duncan Lee , Kitty Meeks , William Pettersson , John Sylvester

Graphs are ubiquitous in modelling relational structures. Recent endeavours in machine learning for graph-structured data have led to many architectures and learning algorithms. However, the graph used by these algorithms is often…

Machine Learning · Statistics 2020-06-25 Soumyasundar Pal , Saber Malekmohammadi , Florence Regol , Yingxue Zhang , Yishi Xu , Mark Coates

In this paper, we present two main results. First, by only one conjecture (Conjecture 2.9) for recognizing a vertex symmetric graph, which is the hardest task for our problem, we construct an algorithm for finding an isomorphism between two…

Data Structures and Algorithms · Computer Science 2017-06-29 Caishi Fang

Recently, there have been some breakthroughs in graph analysis by applying the graph neural networks (GNNs) following a neighborhood aggregation scheme, which demonstrate outstanding performance in many tasks. However, we observe that the…

Machine Learning · Computer Science 2021-04-13 Hanchen Wang , Defu Lian , Ying Zhang , Lu Qin , Xiangjian He , Yiguang Lin , Xuemin Lin

Maximal biclique enumeration is a fundamental problem in bipartite graph data analysis. Existing biclique enumeration methods mainly focus on non-attributed bipartite graphs and also ignore the \emph{fairness} of graph attributes. In this…

Data Structures and Algorithms · Computer Science 2023-03-08 Ziqi Yin , Qi Zhang , Wentao Zhang , Rong-Hua Li , Guoren Wang

In this paper, motivated by a question posed in \cite{AH}, we introduce strongly biconvex graphs as a subclass of weakly chordal and bipartite graphs. We give a linear time algorithm to find an induced matching for such graphs and we prove…

Commutative Algebra · Mathematics 2019-05-08 Sara Saeedi Madani , Dariush Kiani

The subgraph isomorphism finding problem is a well-studied problem in the field of computer science and graph theory, and it aims to enumerate all instances of a query graph in the respective data graph. In this paper, we propose an…

Databases · Computer Science 2023-12-07 Zubair Ali Ansari , Muhammad Abulaish , Irfan Rashid Thoker , Jahiruddin

Perfect Matching-Cut is the problem of deciding whether a graph has a perfect matching that contains an edge-cut. We show that this problem is NP-complete for planar graphs with maximum degree four, for planar graphs with girth five, for…

Combinatorics · Mathematics 2021-11-01 Valentin Bouquet , Christophe Picouleau

Mining maximal subgraphs with cohesive structures from a bipartite graph has been widely studied. One important cohesive structure on bipartite graphs is k-biplex, where each vertex on one side disconnects at most k vertices on the other…

Databases · Computer Science 2021-12-30 Kaiqiang Yu , Cheng Long , Shengxin Liu , Da Yan

Edge-coloured directed graphs provide an essential structure for modelling and analysis of complex systems arising in many scientific disciplines (e.g. feature-oriented systems, gene regulatory networks, etc.). One of the fundamental…

Data Structures and Algorithms · Computer Science 2023-06-22 Nikola Beneš , Luboš Brim , Samuel Pastva , David Šafránek

We consider the well-known problem of enumerating all triangles of an undirected graph. Our focus is on determining the input/output (I/O) complexity of this problem. Let $E$ be the number of edges, $M<E$ the size of internal memory, and…

Data Structures and Algorithms · Computer Science 2014-03-25 Rasmus Pagh , Francesco Silvestri

A simple-triangle graph is the intersection graph of triangles that are defined by a point on a horizontal line and an interval on another horizontal line. The time complexity of the recognition problem for simple-triangle graphs was a…

Discrete Mathematics · Computer Science 2018-09-20 Asahi Takaoka

In the sufficiently sparse case, we find the probability that a uniformly random bipartite graph with given degree sequence contains no edge from a specified set of edges. This enables us to enumerate loop-free digraphs and oriented graphs…

Combinatorics · Mathematics 2026-01-09 Catherine Greenhill , Mahdieh Hasheminezhad , Isaiah Iliffe , Brendan D. McKay

We determine the exact and asymptotic number of unlabeled outerplanar graphs. The exact number g_n of unlabeled outerplanar graphs on n vertices can be computed in polynomial time, and g_n is asymptotically $g n^{-5/2}\rho^{-n}$, where…

Combinatorics · Mathematics 2007-05-23 Manuel Bodirsky , Eric Fusy , Mihyun Kang , Stefan Vigerske

A set $X$ of vertices of an acyclic digraph $D$ is convex if $X\neq \emptyset$ and there is no directed path between vertices of $X$ which contains a vertex not in $X$. A set $X$ is connected if $X\neq \emptyset$ and the underlying…

Discrete Mathematics · Computer Science 2007-12-18 P. Balister , S. Gerke , G. Gutin , A. Johnstone , J. Reddington , E. Scott , A. Soleimanfallah , A. Yeo

We investigate graphs that can be represented as vertex intersections of horizontal and vertical paths in a grid, the so called $B_0$-VPG graphs. Recognizing this class is an NP-complete problem. Although, there exists a polynomial time…

Combinatorics · Mathematics 2015-11-02 L. Alcón , F. Bonomo , M. P. Mazzoleni

In the matching interdiction problem, we are given an undirected graph with weights and interdiction costs on the edges and seek to remove a subset of the edges constrained to some budget, such that the weight of a maximum weight matching…

Discrete Mathematics · Computer Science 2008-04-23 Rico Zenklusen