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The multiple-biomarker classifier problem and its assessment are reviewed against the background of some fundamental principles from the field of statistical pattern recognition, machine learning, or the recently so-called "data science". A…

Genomics · Quantitative Biology 2019-11-01 Waleed A. Yousef

Graphs are ubiquitous in modelling relational structures. Recent endeavours in machine learning for graph-structured data have led to many architectures and learning algorithms. However, the graph used by these algorithms is often…

Machine Learning · Statistics 2020-06-25 Soumyasundar Pal , Saber Malekmohammadi , Florence Regol , Yingxue Zhang , Yishi Xu , Mark Coates

Bayesian network classifiers are used in many fields, and one common class of classifiers are naive Bayes classifiers. In this paper, we introduce an approach for reasoning about Bayesian network classifiers in which we explicitly convert…

Machine Learning · Computer Science 2012-12-12 Hei Chan , Adnan Darwiche

In machine learning, the performance of a classifier depends on both the classifier model and the dataset. For a specific neural network classifier, the training process varies with the training set used; some training data make training…

Machine Learning · Computer Science 2020-06-01 Shuyue Guan , Murray Loew , Hanseok Ko

We present a critical survey on the consistency of uncertainty quantification used in deep learning and highlight partial uncertainty coverage and many inconsistencies. We then provide a comprehensive and statistically consistent framework…

Machine Learning · Computer Science 2026-01-14 Peter Jan van Leeuwen , J. Christine Chiu , C. Kevin Yang

Bayesian Neural Networks (BNNs) have become one of the promising approaches for uncertainty estimation due to the solid theorical foundations. However, the performance of BNNs is affected by the ability of catching uncertainty. Instead of…

Machine Learning · Computer Science 2024-04-15 Shiyu Shen , Bin Pan , Tianyang Shi , Tao Li , Zhenwei Shi

Humans should be able work more effectively with artificial intelligence-based systems when they can predict likely failures and form useful mental models of how the systems work. We conducted a study of human's mental models of artificial…

Human-Computer Interaction · Computer Science 2022-02-01 Kimberly Glasgow , Jonathan Kopecky , John Gersh , Adam Crego

Being a promising model to be deployed in resource-limited devices, Binarized Neural Networks (BNNs) have drawn extensive attention from both academic and industry. However, comparing to the full-precision deep neural networks (DNNs), BNNs…

Machine Learning · Computer Science 2022-06-08 Yanfei Li , Ang Li , Huimin Yu

Parameter identification problems are formulated in a probabilistic language, where the randomness reflects the uncertainty about the knowledge of the true values. This setting allows conceptually easily to incorporate new information, e.g.…

Numerical Analysis · Computer Science 2013-03-19 Bojana V. Rosić , Anna Kučerová , Jan Sýkora , Oliver Pajonk , Alexander Litvinenko , Hermann G. Matthies

Classification is an important goal in many branches of mathematics. The idea is to describe the members of some class of mathematical objects, up to isomorphism or other important equivalence in terms of relatively simple invariants. Where…

Logic · Mathematics 2008-03-25 Wesley Calvert , Julia F. Knight

Image segmentation enables to extract quantitative measures from scans that can serve as imaging biomarkers for diseases. However, segmentation quality can vary substantially across scans, and therefore yield unfaithful estimates in the…

Image and Video Processing · Electrical Eng. & Systems 2020-11-03 J. Senapati , A. Guha Roy , S. Pölsterl , D. Gutmann , S. Gatidis , C. Schlett , A. Peters , F. Bamberg , C. Wachinger

Mapping between sequence and structure is currently an open problem in structural biology. Despite many experimental and computational efforts it is not clear yet how the structure is encoded in the sequence. Answering this question may…

Biomolecules · Quantitative Biology 2013-10-08 Iddo Friedberg

We study the query complexity of testing for properties defined by read once formulas, as instances of {\em massively parametrized properties}, and prove several testability and non-testability results. First we prove the testability of any…

Data Structures and Algorithms · Computer Science 2014-03-28 Eldar Fischer , Yonatan Goldhirsh , Oded Lachish

There are a number of hypotheses underlying the existence of adversarial examples for classification problems. These include the high-dimensionality of the data, high codimension in the ambient space of the data manifolds of interest, and…

Machine Learning · Computer Science 2024-04-15 Brian Bell , Michael Geyer , David Glickenstein , Keaton Hamm , Carlos Scheidegger , Amanda Fernandez , Juston Moore

Graph-structured data appears frequently in domains including chemistry, natural language semantics, social networks, and knowledge bases. In this work, we study feature learning techniques for graph-structured inputs. Our starting point is…

Machine Learning · Computer Science 2017-09-26 Yujia Li , Daniel Tarlow , Marc Brockschmidt , Richard Zemel

Bayesian networks are probabilistic graphical models widely employed to understand dependencies in high dimensional data, and even to facilitate causal discovery. Learning the underlying network structure, which is encoded as a directed…

Machine Learning · Statistics 2022-02-03 Jack Kuipers , Polina Suter , Giusi Moffa

The problem of nearest neighbor condensing has enjoyed a long history of study, both in its theoretical and practical aspects. In this paper, we introduce the problem of weighted distance nearest neighbor condensing, where one assigns…

Machine Learning · Computer Science 2023-10-25 Lee-Ad Gottlieb , Timor Sharabi , Roi Weiss

Methods for learning Bayesian network structure can discover dependency structure between observed variables, and have been shown to be useful in many applications. However, in domains that involve a large number of variables, the space of…

Machine Learning · Computer Science 2012-12-12 Eran Segal , Dana Pe'er , Aviv Regev , Daphne Koller , Nir Friedman

The estimated accuracy of a classifier is a random quantity with variability. A common practice in supervised machine learning, is thus to test if the estimated accuracy is significantly better than chance level. This method of signal…

Methodology · Statistics 2020-01-28 Jonathan D. Rosenblatt , Yuval Benjamini , Roee Gilron , Roy Mukamel , Jelle J. Goeman

Recent studies have shown that modern deep neural network classifiers are easy to fool, assuming that an adversary is able to slightly modify their inputs. Many papers have proposed adversarial attacks, defenses and methods to measure…

Machine Learning · Computer Science 2020-03-17 Igor Buzhinsky , Arseny Nerinovsky , Stavros Tripakis
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