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PyUnfold is a Python package for incorporating imperfections of the measurement process into a data analysis pipeline. In an ideal world, we would have access to the perfect detector: an apparatus that makes no error in measuring a desired…

Data Analysis, Statistics and Probability · Physics 2018-06-12 James Bourbeau , Zigfried Hampel-Arias

Imposing additional constraints on low-rank optimization has garnered growing interest. However, the geometry of coupled constraints hampers the well-developed low-rank structure and makes the problem intricate. To this end, we propose a…

Optimization and Control · Mathematics 2025-10-01 Yan Yang , Bin Gao , Ya-xiang Yuan

A variational formulation for accelerated optimization on normed vector spaces was recently introduced in Wibisono et al., and later generalized to the Riemannian manifold setting in Duruisseaux and Leok. This variational framework was…

Numerical Analysis · Mathematics 2022-05-18 Valentin Duruisseaux , Melvin Leok

The software package BBCPOP is a MATLAB implementation of a hierarchy of sparse doubly nonnegative (DNN) relaxations of a class of polynomial optimization (minimization) problems (POPs) with binary, box and complementarity (BBC)…

Optimization and Control · Mathematics 2018-04-04 Naoki Ito , Sunyoung Kim , Masakazu Kojima , Akiko Takeda , Kim-Chuan Toh

The minimax optimization over Riemannian manifolds (possibly nonconvex constraints) has been actively applied to solve many problems, such as robust dimensionality reduction and deep neural networks with orthogonal weights (Stiefel…

Machine Learning · Computer Science 2023-02-21 Xidong Wu , Zhengmian Hu , Heng Huang

The problem of determining the configuration of points from partial distance information, known as the Euclidean Distance Geometry (EDG) problem, is fundamental to many tasks in the applied sciences. In this paper, we propose two algorithms…

Optimization and Control · Mathematics 2024-10-10 Chandler Smith , HanQin Cai , Abiy Tasissa

We present Extended Riemannian Stochastic Derivative-Free Optimization (Extended RSDFO), a novel population-based stochastic optimization algorithm on Riemannian manifolds that addresses the locality and implicit assumptions of manifold…

Optimization and Control · Mathematics 2023-08-23 Robert Simon Fong , Peter Tino

Machine learning techniques have been paramount throughout the last years, being applied in a wide range of tasks, such as classification, object recognition, person identification, and image segmentation. Nevertheless, conventional…

Machine Learning · Computer Science 2021-08-03 Gustavo Henrique de Rosa , João Paulo Papa , Alexandre Xavier Falcão

Multi-objective evolutionary algorithms (MOEAs) have progressed significantly in recent decades, but most of them are designed to solve unconstrained multi-objective optimization problems. In fact, many real-world multi-objective problems…

Neural and Evolutionary Computing · Computer Science 2019-05-29 Zhun Fan , Wenji Li , Xinye Cai , Hui Li , Caimin Wei , Qingfu Zhang , Kalyanmoy Deb , Erik D. Goodman

A variational formulation of accelerated optimization on normed spaces was recently introduced by considering a specific family of time-dependent Bregman Lagrangian and Hamiltonian systems whose corresponding trajectories converge to the…

Optimization and Control · Mathematics 2022-01-11 Valentin Duruisseaux , Melvin Leok

Copositive optimization is a special case of convex conic programming, and it consists of optimizing a linear function over the cone of all completely positive matrices under linear constraints. Copositive optimization provides powerful…

Optimization and Control · Mathematics 2022-10-05 Zhijian Lai , Akiko Yoshise

We introduce geomstats, a python package that performs computations on manifolds such as hyperspheres, hyperbolic spaces, spaces of symmetric positive definite matrices and Lie groups of transformations. We provide efficient and extensively…

Machine Learning · Computer Science 2018-11-07 Nina Miolane , Johan Mathe , Claire Donnat , Mikael Jorda , Xavier Pennec

Scientific and engineering processes deliver massive high-dimensional data sets that are generated as non-linear transformations of an initial state and few process parameters. Mapping such data to a low-dimensional manifold facilitates…

Machine Learning · Statistics 2018-08-07 Frank Schoeneman , Varun Chandola , Nils Napp , Olga Wodo , Jaroslaw Zola

Modern machine learning increasingly leverages the insight that high-dimensional data often lie near low-dimensional, non-linear manifolds, an idea known as the manifold hypothesis. By explicitly modeling the geometric structure of data…

Machine Learning · Computer Science 2026-03-02 Willem Diepeveen , Deanna Needell

We consider a class of (possibly strongly) geodesically convex optimization problems on Hadamard manifolds, where the objective function splits into the sum of a smooth and a possibly nonsmooth function. We introduce an intrinsic convex…

Optimization and Control · Mathematics 2025-07-23 Ronny Bergmann , Hajg Jasa , Paula John , Max Pfeffer

It is proven that encoding images and videos through Symmetric Positive Definite (SPD) matrices, and considering the Riemannian geometry of the resulting space, can lead to increased classification performance. Taking into account manifold…

Computer Vision and Pattern Recognition · Computer Science 2016-03-16 Azadeh Alavi , Vishal M Patel , Rama Chellappa

Implementations of symmetric positive definite (SPD) matrix-based neural networks for neural decoding remain fragmented across research codebases and Python packages. Existing implementations often employ ad hoc handling of manifold…

Neurons and Cognition · Quantitative Biology 2026-02-27 Bruno Aristimunha , Ce Ju , Antoine Collas , Florent Bouchard , Ammar Mian , Bertrand Thirion , Sylvain Chevallier , Reinmar Kobler

Many geometry processing techniques require the solution of partial differential equations (PDEs) on manifolds embedded in $\mathbb{R}^2$ or $\mathbb{R}^3$, such as curves or surfaces. Such manifold PDEs often involve boundary conditions…

Graphics · Computer Science 2024-07-23 Nathan King , Haozhe Su , Mridul Aanjaneya , Steven Ruuth , Christopher Batty

Optimization over the Stiefel manifold is a fundamental computational problem in many scientific and engineering applications. Despite considerable research effort, high-dimensional optimization problems over the Stiefel manifold remain…

Optimization and Control · Mathematics 2025-05-16 Andy Yat-Ming Cheung , Jinxin Wang , Man-Chung Yue , Anthony Man-Cho So

This paper describes PyOED, a highly extensible scientific package that enables developing and testing model-constrained optimal experimental design (OED) for inverse problems. Specifically, PyOED aims to be a comprehensive Python toolkit…

Mathematical Software · Computer Science 2023-12-20 Abhijit Chowdhary , Shady E. Ahmed , Ahmed Attia
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