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Graph transformers need strong inductive biases to derive meaningful attention scores. Yet, current methods often fall short in capturing longer ranges, hierarchical structures, or community structures, which are common in various graphs…

Machine Learning · Computer Science 2024-05-28 Yuankai Luo , Hongkang Li , Lei Shi , Xiao-Ming Wu

Graph models provide efficient tools to capture the underlying structure of data defined over networks. Many real-world network topologies are subject to change over time. Learning to model the dynamic interactions between entities in such…

Machine Learning · Computer Science 2025-01-03 Amirhossein Javaheri , Jiaxi Ying , Daniel P. Palomar , Farokh Marvasti

Contagions (e.g. virus, gossip) spread over the nodes in propagation graphs. We can use the temporal and textual data of the nodes to compute the edge weights and then generate subgraphs with highly relevant nodes. This is beneficial to…

Information Retrieval · Computer Science 2019-08-27 Saeid Hosseini , Saeed Najafipour , Ngai-Man Cheung , Hongzhi Yin , Mohammad Reza Kangavari , Xiaofang Zhou

Embedding static graphs in low-dimensional vector spaces plays a key role in network analytics and inference, supporting applications like node classification, link prediction, and graph visualization. However, many real-world networks…

Machine Learning · Computer Science 2021-07-23 Claudio D. T. Barros , Matheus R. F. Mendonça , Alex B. Vieira , Artur Ziviani

Most modern Information Extraction (IE) systems are implemented as sequential taggers and only model local dependencies. Non-local and non-sequential context is, however, a valuable source of information to improve predictions. In this…

Computation and Language · Computer Science 2019-04-08 Yujie Qian , Enrico Santus , Zhijing Jin , Jiang Guo , Regina Barzilay

Temporal graphs exhibit dynamic interactions between nodes over continuous time, whose topologies evolve with time elapsing. The whole temporal neighborhood of nodes reveals the varying preferences of nodes. However, previous works usually…

Machine Learning · Computer Science 2023-04-18 Tongya Zheng , Xinchao Wang , Zunlei Feng , Jie Song , Yunzhi Hao , Mingli Song , Xingen Wang , Xinyu Wang , Chun Chen

Self-supervised representation learning on text-attributed graphs, which aims to create expressive and generalizable representations for various downstream tasks, has received increasing research attention lately. However, existing methods…

Computation and Language · Computer Science 2023-10-24 Yichuan Li , Kaize Ding , Kyumin Lee

We propose a novel subgraph image representation for classification of network fragments with the targets being their parent networks. The graph image representation is based on 2D image embeddings of adjacency matrices. We use this image…

Computer Vision and Pattern Recognition · Computer Science 2018-04-18 Kshiteesh Hegde , Malik Magdon-Ismail , Ram Ramanathan , Bishal Thapa

Dynamic graphs with ordered sequences of events between nodes are prevalent in real-world industrial applications such as e-commerce and social platforms. However, representation learning for dynamic graphs has posed great computational…

Machine Learning · Computer Science 2021-12-16 Xinshi Chen , Yan Zhu , Haowen Xu , Mengyang Liu , Liang Xiong , Muhan Zhang , Le Song

Recent works have shown that exploiting unlabeled data through label propagation can substantially reduce the labeling cost, which has been a critical issue in developing visual recognition models. Yet, how to propagate labels reliably,…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Lei Yang , Qingqiu Huang , Huaiyi Huang , Linning Xu , Dahua Lin

Distribution shifts on graphs -- the discrepancies in data distribution between training and employing a graph machine learning model -- are ubiquitous and often unavoidable in real-world scenarios. These shifts may severely deteriorate…

Machine Learning · Computer Science 2025-03-31 Kexin Zhang , Shuhan Liu , Song Wang , Weili Shi , Chen Chen , Pan Li , Sheng Li , Jundong Li , Kaize Ding

Understanding the evolutionary patterns of real-world evolving complex systems such as human interactions, transport networks, biological interactions, and computer networks has important implications in our daily lives. Predicting future…

Machine Learning · Computer Science 2020-08-19 Khushnood Abbas , Alireza Abbasi , Dong Shi , Niu Ling , Mingsheng Shang , Chen Liong , Bolun Chen

Effective information analysis generally boils down to properly identifying the structure or geometry of the data, which is often represented by a graph. In some applications, this structure may be partly determined by design constraints or…

Machine Learning · Computer Science 2016-11-07 Dorina Thanou , Xiaowen Dong , Daniel Kressner , Pascal Frossard

Graph Neural Networks (GNNs) have demonstrated remarkable efficacy in tackling a wide array of graph-related tasks across diverse domains. However, a significant challenge lies in their propensity to generate biased predictions,…

Machine Learning · Computer Science 2025-01-03 Abdullah Alchihabi , Yuhong Guo

Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be…

Machine Learning · Computer Science 2017-05-16 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

The dominant paradigm for learning on graph-structured data is message passing. Despite being a strong inductive bias, the local message passing mechanism suffers from pathological issues such as over-smoothing, over-squashing, and limited…

Machine Learning · Computer Science 2025-04-15 Jacob Bamberger , Federico Barbero , Xiaowen Dong , Michael M. Bronstein

Recently, the deep learning community has given growing attention to neural architectures engineered to learn problems in relational domains. Convolutional Neural Networks employ parameter sharing over the image domain, tying the weights of…

Machine Learning · Computer Science 2019-02-26 Marcelo O. R. Prates , Pedro H. C. Avelar , Henrique Lemos , Marco Gori , Luis Lamb

Reasoning about graphs evolving over time is a challenging concept in many domains, such as bioinformatics, physics, and social networks. We consider a common case in which edges can be short term interactions (e.g., messaging) or long term…

Machine Learning · Statistics 2020-06-22 Boris Knyazev , Carolyn Augusta , Graham W. Taylor

Adversarial attacks exploiting unrestricted natural perturbations present severe security risks to deep learning systems, yet their transferability across models remains limited due to distribution mismatches between generated adversarial…

Computer Vision and Pattern Recognition · Computer Science 2025-05-23 Yuhao Xue , Zhifei Zhang , Xinyang Jiang , Yifei Shen , Junyao Gao , Wentao Gu , Jiale Zhao , Miaojing Shi , Cairong Zhao

Given a set of graphs from some unknown family, we want to generate new graphs from that family. Recent methods use diffusion on either graph embeddings or the discrete space of nodes and edges. However, simple changes to embeddings (say,…

Machine Learning · Computer Science 2026-05-08 Rahul Nandakumar , Deepayan Chakrabarti