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Real-world graph data environments intrinsically exist noise (e.g., link and structure errors) that inevitably disturb the effectiveness of graph representation and downstream learning tasks. For homogeneous graphs, the latest works use…

Machine Learning · Computer Science 2024-12-25 Xiong Zhang , Cheng Xie , Haoran Duan , Beibei Yu

Graph Neural Networks (GNNs) have become the state-of-the-art method for many applications on graph structured data. GNNs are a model for graph representation learning, which aims at learning to generate low dimensional node embeddings that…

Machine Learning · Computer Science 2022-05-23 Davide Buffelli , Fabio Vandin

Synthetic lethality (SL) prediction is used to identify if the co-mutation of two genes results in cell death. The prevalent strategy is to abstract SL prediction as an edge classification task on gene nodes within SL data and achieve it…

Machine Learning · Computer Science 2023-10-18 Xusheng Zhao , Hao Liu , Qiong Dai , Hao Peng , Xu Bai , Huailiang Peng

This paper proposes to cast end-to-end span-based SRL as a word-based graph parsing task. The major challenge is how to represent spans at the word level. Borrowing ideas from research on Chinese word segmentation and named entity…

Computation and Language · Computer Science 2022-09-19 Shilin Zhou , Qingrong Xia , Zhenghua Li , Yu Zhang , Yu Hong , Min Zhang

Zero-shot graph machine learning, especially with graph neural networks (GNNs), has garnered significant interest due to the challenge of scarce labeled data. While methods like self-supervised learning and graph prompt learning have been…

Machine Learning · Computer Science 2024-12-20 Duo Wang , Yuan Zuo , Fengzhi Li , Junjie Wu

Developing generalizable models that can effectively learn from limited data and with minimal reliance on human supervision is a significant objective within the machine learning community, particularly in the era of deep neural networks.…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Wenxuan Ma , Shuang Li , Lincan Cai , Jingxuan Kang

Graph representation learning, involving both node features and graph structures, is crucial for real-world applications but often encounters pervasive noise. State-of-the-art methods typically address noise by focusing separately on node…

Machine Learning · Computer Science 2024-10-17 Guangxin Su , Yifan Zhu , Wenjie Zhang , Hanchen Wang , Ying Zhang

Graph neural networks (GNNs) are powerful tools for learning from graph data and are widely used in various applications such as social network recommendation, fraud detection, and graph search. The graphs in these applications are…

Machine Learning · Computer Science 2021-06-14 Jialin Dong , Da Zheng , Lin F. Yang , Geroge Karypis

This paper looks at semi-supervised learning (SSL) for image-based text recognition. One of the most popular SSL approaches is pseudo-labeling (PL). PL approaches assign labels to unlabeled data before re-training the model with a…

Computer Vision and Pattern Recognition · Computer Science 2022-10-10 Gaurav Patel , Jan Allebach , Qiang Qiu

Self-supervised Learning (SSL) aims at learning representations of objects without relying on manual labeling. Recently, a number of SSL methods for graph representation learning have achieved performance comparable to SOTA semi-supervised…

Machine Learning · Computer Science 2021-08-25 Zekarias T. Kefato , Sarunas Girdzijauskas , Hannes Stärk

Relational deep learning (RDL) settles among the most exciting advances in machine learning for relational databases, leveraging the representational power of message passing graph neural networks (GNNs) to derive useful knowledge and run…

Information Retrieval · Computer Science 2025-03-24 Alejandro Ariza-Casabona , Nikos Kanakaris , Daniele Malitesta

The first provably efficient algorithm for learning graph neural networks (GNNs) with one hidden layer for node information convolution is provided in this paper. Two types of GNNs are investigated, depending on whether labels are attached…

Machine Learning · Computer Science 2020-12-08 Qunwei Li , Shaofeng Zou , Wenliang Zhong

Graph neural networks (GNNs) are a popular class of parametric model for learning over graph-structured data. Recent work has argued that GNNs primarily use the graph for feature smoothing, and have shown competitive results on benchmark…

Machine Learning · Computer Science 2020-11-20 Lingfan Yu , Jiajun Shen , Jinyang Li , Adam Lerer

Graph data are pervasive in many real-world applications. Recently, increasing attention has been paid on graph neural networks (GNNs), which aim to model the local graph structures and capture the hierarchical patterns by aggregating the…

Machine Learning · Computer Science 2020-06-29 Kwei-Herng Lai , Daochen Zha , Kaixiong Zhou , Xia Hu

We propose AGS-GNN, a novel attribute-guided sampling algorithm for Graph Neural Networks (GNNs) that exploits node features and connectivity structure of a graph while simultaneously adapting for both homophily and heterophily in graphs.…

Machine Learning · Computer Science 2024-05-27 Siddhartha Shankar Das , S M Ferdous , Mahantesh M Halappanavar , Edoardo Serra , Alex Pothen

In this survey, we dive into Tabular Data Learning (TDL) using Graph Neural Networks (GNNs), a domain where deep learning-based approaches have increasingly shown superior performance in both classification and regression tasks compared to…

Machine Learning · Computer Science 2024-01-05 Cheng-Te Li , Yu-Che Tsai , Chih-Yao Chen , Jay Chiehen Liao

Recent work on predicting patient outcomes in the Intensive Care Unit (ICU) has focused heavily on the physiological time series data, largely ignoring sparse data such as diagnoses and medications. When they are included, they are usually…

Machine Learning · Computer Science 2021-01-12 Emma Rocheteau , Catherine Tong , Petar Veličković , Nicholas Lane , Pietro Liò

Graph Neural Networks (GNNs) have demonstrated remarkable success across diverse tasks. However, their generalization capability is often hindered by spurious correlations between node features and labels in the graph. Our analysis reveals…

Machine Learning · Computer Science 2026-03-10 Yuxiang Zhang , Enyan Dai

There has been a recent surge of interest in designing Graph Neural Networks (GNNs) for semi-supervised learning tasks. Unfortunately this work has assumed that the nodes labeled for use in training were selected uniformly at random (i.e.…

Machine Learning · Computer Science 2021-10-28 Qi Zhu , Natalia Ponomareva , Jiawei Han , Bryan Perozzi

We introduce segmental recurrent neural networks (SRNNs) which define, given an input sequence, a joint probability distribution over segmentations of the input and labelings of the segments. Representations of the input segments (i.e.,…

Computation and Language · Computer Science 2016-03-03 Lingpeng Kong , Chris Dyer , Noah A. Smith