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The free energy of inserting a protein into a membrane is determined by considering the variation in the spectrum of thermal fluctuations in response to the presence of a rigid inclusion. Both numerically and through a simple analytical…

Soft Condensed Matter · Physics 2007-05-23 Christian D. Santangelo , Oded Farago

The fabrication of nanomaterials involves self-ordering processes of functional molecules on inorganic surfaces. To obtain specific molecular arrangements, a common strategy is to equip molecules with functional groups. However, focusing on…

Mesoscale and Nanoscale Physics · Physics 2021-04-28 Andreas Jeindl , Jari Domke , Lukas Hörmann , Falko Sojka , Roman Forker , Torsten Fritz , Oliver T. Hofmann

The self-assembly of particles into organized structures is a key feature of living organisms and a major engineering challenge. While it may proceed through the binding of perfectly matched, puzzle-pieces-like particles, many other…

Soft Condensed Matter · Physics 2024-04-08 Hugo Le Roy , M. Mert Terzi , Martin lenz

Second-order structured deformations of continua provide an extension of the multiscale geometry of first-order structured deformations by taking into account the effects of submacroscopic bending and curving. We derive here an integral…

Optimization and Control · Mathematics 2017-05-24 Ana Cristina Barroso , José Matias , Marco Morandotti , David R. Owen

Abstract. We present a framework for the kinematics of a material body undergoing anelastic deformation. For such processes, the material structure of the body, as reflected by the geometric structure given to the set of body points,…

Mathematical Physics · Physics 2023-01-23 Vladimir Goldshtein , Paolo Maria Mariano , Domenico Mucci , Reuven Segev

The effect of increasing structural disorder on the distribution of contact forces P(f), inside three dimensional particle assemblies is systematically studied using computer simulations of model granular packings. Starting from a…

Soft Condensed Matter · Physics 2011-08-02 Leonardo E. Silbert

We study how the encasement of a growing elastic bulk within a possibly differently growing elastic coat may induce mechanical instabilities in the equilibrium shape of the combined body. The inhomogeneities induced in an incompressible…

Soft Condensed Matter · Physics 2023-07-19 Paolo Biscari , Pier Luigi Susini , Giovanni Zanzotto

Small axial and flexural oscillations are analyzed for a periodic and infinite structure, constrained by sliding sleeves and composed of elastic beams. A nested Bloch-Floquet technique is introduced to treat the non-linear coupling between…

A fundamental task in developmental biology is to identify the mechanisms which drive morphogenesis. In many cases, pattern formation is driven by the positional information determined by both the gradient of maternal factors and hard-wired…

Molecular Networks · Quantitative Biology 2007-05-23 L. Diambra , Luciano da Fontoura Costa

Over the years, advances in experimental and computational methods have helped us to understand the role of thermodynamic, kinetic and active (chaperone-aided) effects in coordinating the folding steps required to achieving a knotted native…

Biomolecules · Quantitative Biology 2016-10-20 Sophie E. Jackson , Antonio Suma , Cristian Micheletti

This dissertation presents a multifaceted look into the structural decomposition of permutation classes. The theory of permutation patterns is a rich and varied field, and is a prime example of how an accessible and intuitive definition…

Combinatorics · Mathematics 2014-10-13 Cheyne Homberger

This paper introduces for the first time the concepts of non-coherent interfaces and microstructure-driven interface forces in the framework of micromorphic elasticity. It is shown that such concepts are of paramount importance when…

Classical Physics · Physics 2024-01-30 L. A. Perez Ramirez , F. Erel-Demore , G. Rizzi , J. Voss , A. Madeo

When two macromolecules come very near in a fluid, the surrounding molecules, having finite volume, are less likely to get in between. This leads to a pressure difference manifesting as an entropic attraction, called depletion force. Here…

Soft Condensed Matter · Physics 2020-02-26 Nathaniel Rupprecht , Dervis Can Vural

The phenomenological model for cell shape deformation and cell migration (Chen et.al. 2018; Vermolen and Gefen 2012) is extended with the incorporation of cell traction forces and the evolution of cell equilibrium shapes as a result of cell…

Cell Behavior · Quantitative Biology 2021-04-27 Qiyao Peng , Fred Vermolen , Daphne Weihs

Quantifying the outcomes of cells collisions is a crucial step in building the foundations of a kinetic theory of living matter. Here, we develop a mechanical theory of such collisions by first representing individual cells as extended…

Biological Physics · Physics 2019-12-11 Pierre Recho , Thibaut Putelat , Lev Truskinovsky

The motion of flexible fibers through structured fluidic environments is ubiquitous in nature and industrial applications. Most often, their dynamics results from the complex interplay between internal elastic stresses, contact forces and…

Fluid Dynamics · Physics 2022-09-23 Ursy Makanga , Mohammadreza Sepahi , Camille Duprat , Blaise Delmotte

For a conformal theory it is natural to seek the conformal moduli space, M_c to which it belongs, generated by the exactly marginal deformations. By now we should have the tools to determine M_c in the presence of enough supersymmetry. Here…

High Energy Physics - Theory · Physics 2009-11-07 Barak Kol

Different evolutionary models are known to make disparate predictions for the success of an invading mutant in some situations. For example, some evolutionary mechanics lead to amplification of selection in structured populations, while…

Populations and Evolution · Quantitative Biology 2020-07-01 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

We present a theoretical study of classical Wigner crystals in two- and three-dimensional isotropic parabolic traps aiming at understanding and quantifying the configurational uncertainty due to the presence of multiple stable…

Plasma Physics · Physics 2012-04-27 Arūnas Radzvilavičius , Egidijus Anisimovas

Electronic devices exhibit changes in electrical resistance over time at varying rates, depending on the configuration of certain components. Since measuring overall electrical resistance requires partial disassembly, only a limited number…

Applications · Statistics 2025-06-24 Federico Mattia Stefanini , Nedka Dechkova Nikiforova , Rossella Berni
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